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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.4747
Protein type: Transmembrane
Type Confidence: 0.65
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLTTLPQNA KVAVLGAGIS GLTFTYFLSK LRPDLQFTIF EKSKRPGGWM SSPKLHVNNT  60
   61 NESILFEKGP RTLRGVKDGT LLMLDILRKL DLDSQIEVIN EKCNANKKYI LDSSGEIIQV 120
  121 PNSIGTTIEF LKNVKCVDRK LITGILKEPF VKPIKEDETI EQFFKRRLGS TVLTDNVASS 180
  181 IIHGIYAGDV GKLSIKSIMS FMKDIENQSG SIVKHIFKSL YSNKKKEEPQ LSQELQIYNQ 240
  241 LMSPKAELLT LQKTLKQYPM IKLHDGMETL PKYLAEYLIN NTNTKIKYNT SIQDIDAVTG 300
  301 KINGESYDHI RSTINTHDLA KTLPTTDPLV PELKSIEYVS IFLTNVYSRS SNLIPKGKPG 360
  361 FGFLSPRYGN VWKNPDALLG TIYDSDIENN VEGLFVDTKP VHNPNNKITI MMGGHYYTNW 420
  421 TIPSNSVNLK IVKDVLTSKL KVDLSKFNLK VIKDGEPLQI DEINDNDLVI SYSFHSNCIP 480
  481 QYNLGYQETK DKVNQLLDKG YKLSFGGTVF ADGVGVPDCV LNGFKDALKL K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle