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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68465998, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYERIETID NPFNDGNIID NDTSTLFVTE NNDDDDDNTI TTTTTTMQKN NDDNQSSGFQ  60
   61 ESSNQDVTTV SSSSPSNSNN NITNNNNNNN RFSNQRNNNK DNFQKPTTNH NEFKDEDEEE 120
  121 EEEEDDDDMF EPIQFKNSDD DDEEEGDGLS SSSLSSDINS FTDNFGNSYH NIDFDNKRYT 180
  181 LKLNFKGKRL VYFTSGFVSL FVSLFGYSQG VVSSLLAFDT FNKYFNQPSA ATIGIVISIQ 240
  241 EIGAMISSIM VAKLSDKFGR KRTLLLGTFI FMIGGSLQAF CPNIFILAIG RVFSGMGVGI 300
  301 LSTIVPSYQC EISPSEERGK LVCGEFTGNI TGYALSVWVG YLSYFIQDIG DSRNQPHSFT 360
  361 ANLSWRLPLF IQVVIAFVLF LGGFFIVESP RWLLDNDMDQ QGFHVLALLY DSHVESTKPK 420
  421 SEFFMIKNSI LQERITTPKS QRTWKHLLTH YKIRVFVACS SLIFAQFNGI NIISYYAPLV 480
  481 FEQAGFDNAN ALLMTGINGI IYLLSTIPTW FLVDSWGRRP ILITSGIAMA ICLFLVAAFM 540
  541 HINKSYTPSV VAVFVIIYNA SFGFGFGPIP FLLSSESYPL SVRSKGASLA VSCNWFSNFV 600
  601 VGLMTPILKQ EIKWAMYLFP ASSCVLSVIV VLLFYPETKG VELEDITRIF DEFYATSPTK 660
  661 RVKIRGLRTK RKDKGKRSGE KYKAKYNPLS GGGGTGTGTS SSTTTTGDFI DDQEAFEMRA 720
  721 LNEFDFESDN DDDINVSHTR RQML

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle