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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: sp|Q5ANA3|CDR1_C...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.24
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDSKMSSQD ESKLEKAISQ DSSSENHSIN EYHGFDAHTS ENIQNLARTF THDSFKDDSS  60
   61 AGLLKYLTHM SEVPGVNPYE HEEINNDQLN PDSENFNAKF WVKNLRKLFE SDPEYYKPSK 120
  121 LGIGYRNLRA YGVANDSDYQ PTVTNALWKL ATEGFRHFQK DDDSRYFDIL KSMDAIMRPG 180
  181 ELTVVLGRPG AGCSTLLKTI AVNTYGFHIG KESQITYDGL SPHDIERHYR GDVIYSAETD 240
  241 VHFPHLSVGD TLEFAARLRT PQNRGEGIDR ETYAKHMASV YMATYGLSHT RNTNVGNDFV 300
  301 RGVSGGERKR VSIAEASLSG ANIQCWDNAT RGLDSATALE FIRALKTSAV ILDTTPLIAI 360
  361 YQCSQDAYDL FDKVVVLYEG YQIFFGKATK AKEYFEKMGW KCPQRQTTAD FLTSLTNPAE 420
  421 REPLPGYEDK VPRTAQEFET YWKNSPEYAE LTKEIDEYFV ECERSNTRET YRESHVAKQS 480
  481 NNTRPASPYT VSFFMQVRYG VARNFLRMKG DPSIPIFSVF GQLVMGLILS SVFYNLSQTT 540
  541 GSFYYRGAAM FFAVLFNAFS SLLEIMSLFE ARPIVEKHKK YALYRPSADA LASIISELPV 600
  601 KLAMSMSFNF VFYFMVNFRR NPGRFFFYWL MCIWCTFVMS HLFRSIGAVS TSISGAMTPA 660
  661 TVLLLAMVIY TGFVIPTPSM LGWSRWINYI NPVGYVFESL MVNEFHGREF QCAQYVPSGP 720
  721 GYENISRSNQ VCTAVGSVPG NEMVSGTNYL AGAYQYYNSH KWRNLGITIG FAVFFLAIYI 780
  781 ALTEFNKGAM QKGEIVLFLK GSLKKHKRKT AASNKGDIEA GPVAGKLDYQ DEAEAVNNEK 840
  841 FTEKGSTGSV DFPENREIFF WRDLTYQVKI KKEDRVILDH VDGWVKPGQI TALMGASGAG 900
  901 KTTLLNCLSE RVTTGIITDG ERLVNGHALD SSFQRSIGYV QQQDVHLETT TVREALQFSA 960
  961 YLRQSNKISK KEKDDYVDYV IDLLEMTDYA DALVGVAGEG LNVEQRKRLT IGVELVAKPK1020
 1021 LLLFLDEPAS GLDSQTAWSI CKLMRKLADH GQAILCTIHQ PSALIMAEFD RLLFLQKGGR1080
 1081 TAYFGELGEN CQTMINYFEK YGADPCPKEA NPAEWMLQVV GAAPGSHAKQ DYFEVWRNSS1140
 1141 EYQAVREEIN RMEAELSKLP RDNDPEALLK YAAPLWKQYL LVSWRTIVQD WRSPGYIYSK1200
 1201 IFLVVSAALF NGFSFFKAKN NMQGLQNQMF SVFMFFIPFN TLVQQMLPYF VKQRDVYEVR1260
 1261 EAPSRTFSWF AFIAGQITSE IPYQVAVGTI AFFCWYYPLG LYNNATPTDS VNPRGVLMWM1320
 1321 LVTAFYVYTA TMGQLCMSFS ELADNAANLA TLLFTMCLNF CGVLAGPDVL PGFWIFMYRC1380
 1381 NPFTYLVQAM LSTGLANTFV KCAEREYVSV KPPNGESCST YLDPYIKFAG GYFETRNDGS1440
 1441 CAFCQMSSTN TFLKSVNSLY SERWRNFGIF IAFIAINIIL TVIFYWLARV PKGNREKKNK1500
 1501 K

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