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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.12125, orf...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKKGHEYIQ LSTFSEHENE HEPESSSTTS SPPPPGIRQY EKQHEWNFTD LQLQFVLLRL  60
   61 GVISDEVYHN QNFSLSDPDI HISKEVEYMI NKIDQLSISE AIEIIRDALA DHNGDVNFLI 120
  121 EDYQLLERLI SQIPNNIESQ KSNQNVETNL DELPEMKYPM QSTFKNKTYL TIIDWSLQIR 180
  181 LEAALIHYHS PYPEIRAITD PFDDPNTPVE TFRAYFIALF WTFIGSLINS FFYHRMPGIS 240
  241 LGTHTIQILL LPSGKLWEKL IPLNKTITIN NTKINLNPGP WNFKEMMLST IIYSCSASTP 300
  301 YSINNIFVMK LDRFYGLKWV NWIFQILFTV STQLLGFSFA MIMKKVCVYP SKAIWPTILP 360
  361 TIALNRALMN QDNASNNSIV HGWKISPYSF FLVTFTLSFI YNWIPSYFFK ALSLFNWPTW 420
  421 FNPNSIHLVN ITGSNVGLGF NPIPSFDWNV IGGSSMVIPF YTFVNRYLGT FLGFIIILIV 480
  481 YYTNNNWTAY LPINSNRLFN KKAQLYNVHD ILNDDNKLFD NEKYQQIGPP YFSAANLVIY 540
  541 GAYFCLYPFA ILYHGLTEWN SMKTSFINVW TSIVDAFKSE SEMGVSVESN DDNNLSLHRQ 600
  601 YGRYANDPHC KMMAHYPDVP DWWFITILVV STSFAIAAVW FYPVETPIWG IFFTIAINFI 660
  661 FLIPLTSIAS VTGFSFGLNV LVELIVGYAI PNSGIALITL KAYGYNIDSQ ASNYITDQKL 720
  721 AHYAKIPPRA IFKGQLLSTL LNIIISLSVA NWQLNNVENI CDPHQKDNFK CPGANTYFYS 780
  781 SIQYGEIGPA KVFGGLYPIL KWCFLLGVLL VFPCVWLKRN GPTKIFQRYF QPTIIIGGML 840
  841 DFAPYNLSYF TGGLYISYIF MFYIKKNYLL WWEKYNYILT SALSAGVAFS ALIIFFTVQY 900
  901 HPHPLHWWGN SIGQQGIEGG EISPIWKNID TAPDGYIGLR KGHFP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle