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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.12058, orf...
Protein type: Globular with Signal Peptide
Type Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPHKKVVIVG GGISGIKAAA DLYKSGIKST VILEAQPRLG GRLFTVESTQ NKGTTYDYGA  60
   61 SWFHDCLNNP LFDKAQQLEN VKYYFDDGKS LYFNKFEGQI EKWRFETVLE EMMTYFQWVY 120
  121 KQDPDKLDIS VKQLAQEYVD KYRNVLTKEQ IELSLSAVRM WSELWHGESW DLLSGKYTFA 180
  181 DDGHLGRNAF VKNGYSTVFI NELKELPRAY RDSAIKLNAQ VIKIDYTNKK KILVYLKDGR 240
  241 TYSCDYIIVT IPQTILKITN AKDENYVEWV PELPPNIQKV LPDVHFGSLG KVVLEFDDCF 300
  301 WPRDVDRFYG LTSNTPSQDT ISVDAWDYPT ILINYQAVNN VPSLVALTQN PLSKYIENLQ 360
  361 PHEKQQRIWS IFKPLIAKIC ESKGIQDIPE PHSIYHTPWN NESLFRGSYG TSLVGTQDPS 420
  421 SVIKAFVDGY QDRIKFAGAE TMDDTSNGCA HGGWFSGQRE AKFIVQQEAK KKVDSKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle