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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.12502, orf...
Protein type: Globular with Signal Peptide
Type Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASGKNNISI SSLLDSSSTP SSQPAGQAQK PTSSSSKSTV NNGRKPIAIS EMVSKFQTSF  60
   61 NAGPVESEVI IIDDSQESTS SGEAESSSTQ VPKPEPKPKL EPKSKPVSKR VSPPVAKSAT 120
  121 SSKQYKTIKP NVQKGNTPPT RTAISTDQVK KFQTNFHLNP VTNQTSPSKT SITSIINIDD 180
  181 EPIPAPVSTP TSANNSPGNT NTNATKRKRA NVKLFDPKKR QAVSSITTGE TTATTKKKSP 240
  241 ERQDRSASQV KLAQKSSSTT TGGLQKSPLL EKKADKTASG NSSSLKKQSS SLGAITDKND 300
  301 SPVPVKLSAP SVIDLLNDDS EPETSQTDDK QSAQGNNNDK KIEGNKEPKQ EETQISKKEE 360
  361 KPTPREKEKE KEKPEPPIIA LNIPLLNPKD PQPGKAEVIV NVLKLAEEKY GWGIMHPKSK 420
  421 SAIDVMDDMI DDEDDDDNED DDDIIEIVEN QPPPSPLPSH QIQQSKSAQG ANGNSGTSSN 480
  481 QQQKGKELTE EQLYRQHEVK MIRKVGKYDF EDPFIDDQEL QMEEEISSTK EGFFVYWGPL 540
  541 VDDRNSNKKK KR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle