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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AKR1_CANAL
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKKKSKSKS SSPKPKVSST AAKPVEIDNQ QNIENVQDSP SALQQQSATA EESENTATTA  60
   61 TPSEGTTATT ESSPVTTSNE TDPIELSVLD NADHAIDSNS IKSTEAVLET LDSELNTIAD 120
  121 TKTEPPTEQE LNPTLAKYMR SCQEGNLTIV KELISSGQVL VNDTFSDEIT GLHWACINNR 180
  181 LSLVKFLIAN GANPNQLGGE LKASPLHWAC RNGLVYIVDY LMRNSDADPN LRDAQTYNAL 240
  241 HLAVHSSNIM LVIYLLLSCC STDSVKKVYI DEPDGSNRTA LHWASYQNDI FTINALLRFG 300
  301 ADVSKVDNSL FIPLHWAFMK GYKSVLKALV EAGSDIYFKN DQNKNSFDIA KDMNCSNTWE 360
  361 KVLIETGRDP KNNWAPLKPW VSAKLGKIIT FLTPYFLLPL SFNVLSMGGD QGGFIIPKLI 420
  421 LAIGILGGGI YLLNKLIISQ YIFDDKKLAK SPILAGVFSA TAFWSVLVWL YNILPTTFIH 480
  481 NFFANVIMAI LIAIFTWSFF KAMFINPGFV PTPADNNVIL SQVAQLIELG KFDTDHFCVN 540
  541 SFVRKPLRSR YSKHNKRLIA RFDHSCPWVY NDIGVRNHKI FITFVYSLNM AIFVFLYLSL 600
  601 QYFDKVKDQY DSDDEGEGEG FVCSILGDDM CYGYKNHHFH FNVFMWDLFQ CVWVSFLCIV 660
  661 QTFQILKGLT TWEFSSLNKQ LQTNRFNHST VPRDFEAGEG ISLDQTQPSD GQHRHNHNEF 720
  721 QTCMNLLGID QFILTLKMSL KSLFSNTRHG NNNTNYDPLT SLHIPTDHGI KQNWLDFWII 780
  781 GEEKWRNVFY LPIDGENNLN GKVVDYYTLY SYH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle