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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.9240, orf1...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.68
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFSTLHFAF LATLSSIFTV VAASDTTTCS SSKHCPEDKP CCSQFGICGT GAYCLGGCDI  60
   61 RYSYNLTACM PMPRMSTFQE SFDSKDKVKE IELQSDYLGN STEADWVYTG WVDYYDNSLL 120
  121 IQMPNHTTGT VVSSTKYLWY GKVGATLKTS HDGGVVTAFI LFSDVQDEID YEFVGYNLTN 180
  181 PQSNYYSQGI LNYNNSRNSS VNNTFEYYHN YEMDWTEDKI EWYIDGEKVR TLNKNDTWNE 240
  241 TSNRYDYPQT PSRIQFSLWP GGDSSNAKGT IEWAGGLINW DSEDIKKYGY YYAHIKEIYA 300
  301 TAYDIPNDVK LDGNSTKESD YHAFLYNSTD GDASNIMLTT KKTWLGSDDA TGFDPQNDDE 360
  361 DSSSNKAQET TITSVSGSST ITSVKTDSTK KTANVPAQNT AAAAQATAKS STGTNTYDPS 420
  421 AGVGGFVQDS KSTDSGSSGS SSQGVANSLN ESVISGIFAS ICLGILSFFM 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle