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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.1607
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDSESYYQN STTNQPIPRS DEVLDDHRNQ ITNDCAISDS EDELELKPEL ESEVVKSEKQ  60
   61 QQQHHQEITS DNAKPLTRKS GSSIKKKSNL TDKDRITNPM SLSGGDDTIN SGHKNRNYNM 120
  121 SSLRKDFYLK DNTDDNSTNN HTHLAIPIPI PIPTPIITNA NKSRRKSQLE NLPPLIKKKT 180
  181 IGRNNSNNFE NDLVSPMTKM KTNDSEDITN TTSTTANHMK LGIGATTLGV GTGTTATATA 240
  241 TATAGGGGRR PSRSSIDSEA DSHASRSSQE TEEDVCFPMV GDHIRVNGID FDEIDEFIRE 300
  301 EREEAYLQKQ MIAKNISRID EFQNLSKTNT TSGASRHPYH HHSNNNKKNN GGDGSSGSSM 360
  361 AALKYTPKNI LKKTLSRFEF THENSSSSEE IYELKTKQQP PYKYDDQLSL TSSTSSTSGS 420
  421 GSGQVKFGGA RISDGINGGS LPDRFSLFHS ESEETIHAPD IPSLVSPGQS VRDLFRNGEE 480
  481 TWWLDCTCPT DSEMKMLAKA FGIHPLTAED IRMQETREKV ELFKSYYFVC FHTFEADKES 540
  541 EDYLEPINVY IVVFHDGILT FHFSPISHPA NVRRRVRQLR DYVDVSADWL CYALIDEITD 600
  601 GFAPVIHGIE YEADAIEDAV FTARDTDFSS MLQRIGESRR KVMTLMRLLS GKADVIKMFA 660
  661 KRCQEEANSS SGYYQRQYNL QQQQQQQAPP PPPPNPIITS PINSTLNLNS LGTSTGGGVG 720
  721 VGGINFGPNP TGNNTNTNTN TTGSPSPPQQ QQHGITNKSF PIPDARPRAD IALYLGDIQD 780
  781 HIITMFQNLL AYEKIFSRSH SNYLAQLQVE SFNSNNKITE MFSKITLIGT MLVPLNLVTG 840
  841 LFGMNVRVPG EGGKNLGWFF GIVGVLIFII IGSFIFAQWW LKKLNNSIEG QNNGNRPIFN 900
  901 HSSRRSIRSL GLKKHGGNKS IISFPNKYE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle