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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.843, orf19...
Protein type: Globular with Signal Peptide
Type Confidence: 0.40
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLPKRLLRS LIYLIFFLTV SLFLLLLANK HQIIEINKYI PFDIFGTAAP LFFQPPSDSF  60
   61 IVDISFDNCF KFSFNNKRCG LPDINKGLLG DKAQWYRLRK DICLGSSWSK KQYLNYKKIK 120
  121 HDKYEEYLSA GKKNNKNVVD EVIIDIAVAD PVNDVKIKGN EKLKLPKHII QTFHNKQVYD 180
  181 DDTHASFTEQ NTNNIVNAAP VDDQIQAELE SEGNKDVTTA EENRKEEESK KEQDDERKDA 240
  241 AQEDAKEKGK EAEKLKQSSE QNGNDQPKEF EEEIKPESPK DEKKDKREIV TNRNDLNRVL 300
  301 YVPKMEAVLK SGWRYKSNGI WLKYGPHSSK NAVSAIDLLF GYETVDPRPN WNLIKTPIIG 360
  361 VSNPSNLPAY ITFRRGPKID YKKEIGTTLT MNSEDKFKIL QIADLHFSTG YGKCLDPQPP 420
  421 SSAKGCKADS RTLEFINKVL DLEKPDMVVL TGDQIFGDAS PDSESSAFKA LNPFVERKIP 480
  481 FAITVGNHDD EGSLKREEIM GLYADMPYSV AAMGPASIDG FGNYVVTVQG KSSKATALSL 540
  541 YFVDSHAYSK TPKVTPGYDW IKENQLIYLK QEAESIQNSV EKYRKSNKIP LAMAFFHIPL 600
  601 PEFRNLNQPF IGENREGVTA PRYNSGARQV LSEIGVSVAS VGHDHCNDYC LQDTQQSSSP 660
  661 GDNKMWLCFG GGAGLGGYGG YNGYIRRMRV YELDTSKGEI KTWKRTEDNP GNIIDEQVLV 720
  721 SNGDVVNW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle