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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.7115
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESGMFSSII SSACNNKMSL RTTYPLDYTL SINNKNFFLY IFFFFPPPPF SILTIYIFFN  60
   61 CLLLLFFFSF ALFHQTQFIM SSPNTGKSLF NTFTRNLKMV LSNESLPHVS DNENDSKSPM 120
  121 STSPPQNIPI PQNPSLFHNP HQQPSTPSGN SYLNAVHSGI SRVRSNSLNP SETSVRQQNV 180
  181 YFGVTLDNAL VQGFAKISIL GTDNNPDGLN YGKIPIVVAK CGVYLKKNGL TVEGIFRVGG 240
  241 SSKRLKELQI IFNTPPDFGK KLNWEGYTVH DAATILRRYL NALPEPLIPL EMYEVFRDPL 300
  301 RNRSRIINYM KYKAAVATSS ISSPNPHTAR ANGNNNNNSY FPDMSQPLTE ANIGKLNHDI 360
  361 APRKNSESSS NVFSQSAPMP LSEEEVNTKS KKKSKSYKKL TNDIHEAIDE YKLLVNELPL 420
  421 ASKQLLFYIL DLLSMVQAQS KENLMNSRNL AAIFQPSILS HPNHDMDPVE YALSQAVVEF 480
  481 LIKYSYKLLP TTVSASPAVK SPVAARDESD VTSTSTTPLN EESHLSKENY PHRESVTSEP 540
  541 QDSLVAGFQH NVTGSIPFDS DIESDIGSDL DDLNFQQLKL NDGSPVKSSP PPAPQMPAAI 600
  601 VVSPPSSSSV HQSDK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle