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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|9963992, gi|7...
Protein type: Globular with Signal Peptide
Type Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPSIVISIV LASFVSAESS ITEAPTTTAE DNPYTIYPSV AKTASINGFA DRIYDQLPEC  60
   61 AKPCMFQNTG VTPCPYWDTG CLCIMPTFAG AIGSCIAEKC KGQDVVSATS LGTSICSVAG 120
  121 VWDPYWMVPA NVQSSLSAAA TAVASSSEQP VETSSEPAGS SQSVESSQPA ETSSSEPAET 180
  181 SSSEPAETSS ETSSEQPASS EPAETSSEES STITSAPSTP EDNPYTIYPS VAKTASINGF 240
  241 ADRIYDQLPE CAKPCMFQNT GVTPCPYWDT GCLCIMPTFA GAIGSCIAEK CKGQDVVSAT 300
  301 SLGTSICSVA GVWDPYWMVP ANVQSSLSAA ATAVPSSSEQ SVETSSESAE SSQSVESSQP 360
  361 AETSSEQPSE TSSETSSQQL SSITSAPDSS ATSSSSTTST FIRTASINGF ADKLYDQLPE 420
  421 CAKPCMFQNT GITPCPYWDA GCLCVMPQFA GAIGSCVADS CKGQDIVSVT SLGTSVCSVA 480
  481 GVNAPYWMLP ASVKSSLSVA ATAVPTSDSA SETASQEPSE TSSEQPSETA SQQPAETSSE 540
  541 ESSTITSAPS TPEDNPYTIY PSVAKTASIN GFADRIYDQL PECAKPCMFQ NTGVTPCPYW 600
  601 DTGCLCIMPT FAGAIGSCIA EKCKGQDVVS ATSLGSSICS VAGVWDPYWM LPANVQSSLN 660
  661 AAATAVATSD SASEVASASE SASQVPQETS AASSQSANNS VASAAPSNSS VSAAPSSNSS 720
  721 GVPAAPSNNS SGASVVPSQS ANNSSASAAP SNNSSSAISE SVAPSSYGNS TIAQPSTSTK 780
  781 SDAASITGPI TTDKVITNES GIVFTSTVII THVSEYCDQT SAAAVQSSAC EEQSSAKSEQ 840
  841 ASASSEQVKV ITSVVWCESS IQSIESVKTS AEAAHKTEVI ASCASELSSL SSAKSEAMKT 900
  901 VSSLVEVQKS AVAKQTSLAA VQSSAASVQL SAAHAQKSSE AVEVAQTAVA EASKAGDEIS 960
  961 TEIVNITKTV SSGKETGVSQ ATVAANTHSV AIANMANTKF ASTMSLLVAS FVFVGLFI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle