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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76573538
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.95
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLILSTLIV FIHTLLVSAL PTKEGSDPNS AKKYLVSDLP GLHENITPDN SIPLMFAGQL  60
   61 EIYPETDTHY FFWKFSDSNP ETVTNRTIFW LNGGPGCSSM DGALLETGPF RINSQQQVIS 120
  121 NNGSWHKMGD IIYVDQPAGT GFSYSDTYIT DLDQVAEYFL KFMEKYYELF PEEIGYEIYF 180
  181 AGESYAGQYI PYIADAILQR NKKLVDGEHK YDLRGVLIGN GWVSPNEQSL SYLPFFKDHG 240
  241 LIDVHHPKWA TLLAKHEQCQ KIVNKIDSTF DDGVVHYYEV SSSTCEAILT DLLEYTQDTA 300
  301 SEKDQRCVNM YDYTLRDSYP SCGMNWPYEL VNVGPFLRQE KVMHQLNLIN LKKWNECNGR 360
  361 VGRTFQARHS IPAVHLLPEL AKEIPVMLFN GANDIICNSQ GVLSYLQKLQ WNGETGFTNK 420
  421 DNQISWIYDN KEVGYIIWER NISFINIYNS SHMVPYDLPD VSRALIDLIT GKYDEKDVDG 480
  481 KKSFVTYPLG SRKESDASAD GEENAGSDKV PGDSPSQTID PMISSSTASS SSVESSLSSS 540
  541 TASADSDSTS SKFTRLIQLA VILVIFWGVY VLYASYKSRP SSIIKKPTNN TSNVTRSSAG 600
  601 KKKNVQWADQ LNQFEDDERT QEPNQGIIAK AIGKITGSKD TRGRYAPVQR GNGNEYIDDI 660
  661 ELGEGLSDPN VDEFIIGSDD DEEQGQAHSG AATHNQKQKP MN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle