YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.290
Protein type: Globular with Signal Peptide
Type Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIARYIYYT IAVAVLLNFV KATDNNNFKL ELEASWSNID FLPSFIEAIV GFNDSLYEQT  60
   61 IETIFGLGDT EVELEDDASD QEIYSTVINS LRLTDQDLDF INFDLTNKKH TPRIAAHYDH 120
  121 YSDVLTKFGD RLKSECAKDS FGNAVETKNG QIQTWLLYND KIYCSANDLF ALRTDLSSHS 180
  181 TLLFDRIIGK SKDAPLVILY GNPTEESTKD FLKILYPDAK AGKLKFVWRY IPSGIKKSDS 240
  241 ISGYGVSLKM EKYDYSGAEG NTKYDLSRDF TRINDSQELV LVIGKHSYEL GVKLTSFILS 300
  301 NRYKTTKYDL LDTILTNFPK FIPYIARLPK LLNHEKVKSK VLGNEDIGLS QDSYGIYING 360
  361 SPINPLELDI YNLGTRIKEE LQTVKDLVKL GFDTVQAKLL IAKFALLSAV KQTQFRNGNT 420
  421 LMGNNENRFK VYENEFKKGS SEKGGVLFFN NIESDNTFKE YTTDREEAYL GVGSHKLKPN 480
  481 QIPLLKENIH DLIFALNFGN KNQLRVFFTL SKVILDSGIP QQVGVLPVIG DDPMDSLLAE 540
  541 KFYWIAEKSS TQEALAILYK YFESNSPDEV DDLLDKVEVP EDYKVDYNHV LNKFSISTAS 600
  601 VIFNGVIYDL RAPNWQIAMS KQISQDISLI KTFLRQGPIE GRLKDVLYSN AKSERNLRII 660
  661 PLEPSDIIYK KIDKELINNS IAFKKLDKAQ GVSGTFWLVS DFTKSEIITQ LIDLLLLLKK 720
  721 KAIQIRIINT GDTDVFGKLK TKFKLTALTN GQIDEIIEIL KKSNASSANN DELKKMLETK 780
  781 QLPAHHSFLL FNSRYFRLDG NFGYEELDQI IEFEVSQRLN LIPDIMEAYP DEFRSKKVSD 840
  841 FNSVLSGLDN MDWFDLVTSI VTKSFHVDEK RFIVDVNRFD FSSLDFSNSI DVTTYEENSP 900
  901 VDVLIILNPM DEYSQKLISL VNSITDFSFL NIRILLQPRV DSKEEIKIHK FYRGVYPQPT 960
  961 PKFDSNGKWI QHYSAQFESI PSNVTYSTEL DVPHKWIVVP QSSSMDLNTI NFSESHSVDA1020
 1021 KYSLKNILIE GYARDIHTGK APDGLIFRAF NKNYSTDTLV MTSLDYFQIK GYPSIFNFST1080
 1081 TSNDTLLSAS ENKYQANTEE LESIEVPVFK IDGSTIYPRV MKSGNNKPMS TRKHADINIF1140
 1141 TIAGGQLYEK LTSIMIASVR KHNPSSTIKF WILEDFVTPQ FKHLVELISI KYNVEYEFIS1200
 1201 YKWPNFLRKQ KTKERMIWGY KILFLDVLFP QDLNKIIFID ADQICRADLT ELVNMDLEGA1260
 1261 PYGFTPMCDS REEMEGFRFW KEGYWSDVLK DDLKYHISAL FVVDLQKFRS IKAGDRLRAH1320
 1321 YQKLSSDPNS LSNLDQDLPN NMQRSIKIFS LPQNWLWCEM WCSDKSLEDA KMIDLCNNPL1380
 1381 TRENKLDAAK RLIPEWIEYE QAIEPLVSLV QNNTAKEVVQ EIEIDTDGEQ EEQEQESNDD1440
 1441 DFIHDEL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle