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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.2081, orf1...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSTDTEIRR KRNRESSSQP LIPTSVLDQA SQRLFIVSIF ILIQSWKIYD LVLLKSEIPA  60
   61 TGEVLTSLSN FTFVLKYSVL DGLFLWLLPV LNIQYLSFSP LKTLLLTITL YGFSIFLVSA 120
  121 MALPLLSNVF LPIWRFLLQK KELNIIGESI DRSQVIDMDS HFKGQLTIHY LPDSSAKMNP 180
  181 FHFDQTCLGL DNNHLINMPV EFNTTSGIGY LQVQHTTPDN EIQYLNYTGH SLRRLFKKDY 240
  241 THLSQYKDYK KSDKRIFYLE YPITKPGMYR IKNVLDNKGN SIRTYKSEFV ISDCPSAKFF 300
  301 YPPNFESSNG FKCVTTLEDD SFPLPWVEVS STTPSSVKLN VKVNGKEFRM MNLTIGQETD 360
  361 HKVSRTDFSW LKTVRLVRNS LQEKILDSKS TFNWGDTSIL EFQLLQVKDS FGNVHRYEPL 420
  421 SKDKDVWYKL ELRKSPSIGI YDKEKTQELL VGGQKVLYFS NLENFNDDDF PIDVKVKYIG 480
  481 QEEQNITRTF ETKADLRNGL TITKPGKYVL SSAKDKYCPC EADKTPVEVE LASIPSLDIV 540
  541 ADPVSDRCLG TIGYNFDFNF TEGRPPFRVQ YRIYSNTSGI LKPVYSDTGK LNRELKSFEK 600
  601 SHSFKFKPPN EGSYTIMFTN LKDANYFKDP IALDENKYSY STYFRQLSQV GFQVHQRTIH 660
  661 TCYGHTTKVP IFFNGNGPFS FEYDFLDVNS RKKLVDTVRV SNVENYAIDT PKELIGKTYD 720
  721 LKLSNAKDRF GCDAIIVDAN SPVRVVSRSD IPEVEFSRAG QKLQVVEGSY VDIPLSIKSK 780
  781 IAVNGNDKIE VKYLGPTSKE PTIRRAQLVG SSIRLSDEGT YWLHSFESNG CAGRIGKADQ 840
  841 FVTIGYYAKP SLAISASNEM LQHTDDSTIH LKPVCNGCSN EITLKLTGEA PFVVDYEINL 900
  901 PSGKMETHSM NIDTHDITIK LPTRSNGRFE HQFKRVYDRL YTKTRGKPTS LHVPKVIYDI 960
  961 NPLPTAQFLP DDHFTQVCEN KLSEDSVIAH VPIQFSGAYP FDVLLTLTNE KIGKMHDIRY1020
 1021 RNVEDNYITL KTLNFLGLGD YSLKFAKVSD ANGCTTHQFK TNDRYLISIT EPPTIYKADP1080
 1081 ATKHYCVGDH VAYNLSGVFP ITIFYEYNDK VRRVESYSRF ERLASRPGVL NIHGLKDSGI1140
 1141 NSCAVNYTFD TTKLDELRLE VHEIPTVEVN KGDYLIEDLH EGDQTELIFT FLGEPPFQLT1200
 1201 YIRTIDIRKG KKTFRKLVEK ETIKDIWQHE LVVMASLEGT YEAIEIQDKY CRAVKKVDYI1260
 1261 E

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle