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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.2050, orf1...
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIPLIGRLS LSDWPLIIIS FTLAWVEFII SLITTLLPSK FIDFCTFVTK QVYKFTPNPI  60
   61 TLIIKQKKID INDEENIKYS YIKSDIPKFT KKSYDLTIEL LNSENIEQMV SLFGYEIESR 120
  121 IVRTQDDYLL TIHRIKGKNR PSNGKVIYLH HGLLMCSEIW VTMIDKYQNL PFILYDLGYD 180
  181 VWLGNNRGNK YSQKHLFYNL NSTKYWDFSI DEFALFDIPD TIDYILQTTK KSKLTYIGFS 240
  241 QGSAQAFASV SVNSDLTDKI DQLIAISPAT TPHGLYSKFL DILLKSSPNV IYLLFSRRVL 300
  301 MPSCIFWERI MYPPLFDNMI DIANYLLFNW RATNITKLQK LSSYAHLYST TSVKCVVHWF 360
  361 QVMSSKNFQM YHDSNSNLSG LKPISYPLKN IQVPIRLIYG TTDSLVDIDV MKSQLPKSTT 420
  421 KAYPVENHEH LDNLWGNDVY EVVFKKVLRF LGEDTDKVYA RLFRQSEDTK FIEDIIQTDE 480
  481 SFTVDDGETL NNSSGNVNQS YLKSAGNARS ASNSGNIQVE SDIVIDYERQ QSIGGTSIFL 540
  541 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle