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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.5612, sp|Q...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKSYMPLFR SPRQFKKIYF ILIPLILAVI ILHVFFDGFN KISEYSPTFI SNRILNHQDQ  60
   61 QQKSEKSSDV ISSYFPSLAI YPKNFDNRVE FVNEPKNSKW IQYFGDSKTV LSNYITNQTY 120
  121 TNHSIGLYSS STVRPPASSC KDILYERSFE ITKYRTLHDD LYKLATTLLY QLENDPAFQD 180
  181 LSPFFNDRLP HIIMRGELHK HIYKFAGTSV WLEQHGVHLM LSRVIYSQQG KKNDPQLSLL 240
  241 YAQVYDENWN ELNDIELIVP VINPNGERVY DSVKYPQFVA IPFYHNSEYI KSRWYGPEDT 300
  301 RLILTKNKFG DDEPVIIFNS YHRQIKDMST EDDNNVHTKF EFYRSMFVGW LFQYQLGKLN 360
  361 TDGIQDSKFN NVTFNKVKEL RIEGKERTSI EKNWTPFIDP DERNQISYYG NHNLGDNYVY 420
  421 IVYQWNHLKI LKCELDNFID SSHSTCTMFF KDVETTQEVG PVRGGTELWP IKIDNNNNNN 480
  481 NLNEDDLSTK QEPQQQRQLW IGFLRAHVKD CGCGGSMYRP NFLILEKLNS KFKLTYLSGS 540
  541 INFNVSVYGW ANYDVVCAGH EANALIPNGI SMFDQDDDYL TLSMSVADQD NTLVHIHGVK 600
  601 KLIYSLDHDW NGILKENKQI ECVVNNANDF CKAYADEHYK LGDSEAAVKE VKQKAKEEAE 660
  661 KAKAEKEKAE KEKAEKEKAE KEKEEKEKEE KEEKEKAEKE KEEKEKAEKE LAEKELAEQK 720
  721 DEDAKDEDKN EDEDDKEKND ESGLTEKSEV EENGENANEG GEDDGDGDGE EEKEDDDDID 780
  781 VYNMRFNMQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle