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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.6081, orf1...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.71
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLKSLFPSI LAATSFVSSV AAEDLPAIEI VGNKFFYSNN GSQFYIKGIA YQQNNLDSNE  60
   61 SFVDPLANPE HCKRDIPYLE AVDTNVIRVY ALDTSQDHTE CMQMLQDAGI YVIADLSQPD 120
  121 ESINRDDPSW DLDLFERYTS VVDLFHNYTN ILGFFAGNEV TNKKSNTDAS AFVKAAIRDT 180
  181 KAYIKSKGYR SIPVGYSAND DSAIRVSLAD YFACGDEDEA ADFFGINMYE WCGDSSYKAS 240
  241 GYESATNDYK NLGIPIFFSE YGCNEVRPRK FTEVATLFGD QMTPVWSGGI VYMYFEEENN 300
  301 YGLVSIKDNT VSTLKDYSYY SSEIKDIHPS SAKASAESAS SISRTTCPTN TNNWEASTNL 360
  361 PPTPDKEVCE CMSASLKCVV DDKVDSDDYS DLFSYICAKI DCDGINANGT TGEYGAYSPC 420
  421 HSKDKLSFVM NLYYEQNKES KSACDFGGSA SLQSAKTASS CSAYLSSAGS SGLGTVSGTV 480
  481 RTDTSQSTSD SGSGSSSSSS SSSSSSSSGS SGSKSAASIV SVNLLTKIAT IGISIVVGFG 540
  541 LITM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle