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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.13474, orf...
Protein type: Transmembrane
Type Confidence: 0.93
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSEIPPIKN TNYNCKIPRS TFFVVCVFSL LIYSLSTIYR SSGLVLPPLS FIDQIPENLS  60
   61 RSDPYLTLHV DISDDPLSDK IGQPELNPSP KHLHVGSKAM VASDVPLCST MGKEILLRGG 120
  121 NAADAAVTVA LCIGSVNSHS SGIGGGGFIV SRNNGDAISI DAREMAPGSA YKEMYGNSLV 180
  181 LSKIGGLSIA IPGELKGLYE LFKLHGSGNL SWKQLFEPVI KLNRNGFKCS KIFETVLAKE 240
  241 YDLVLSRVPV LKDSWDFIFK PNGELLQEGD VITRPNYANT LELIANNGSS SIFYDPNGPI 300
  301 VQSLVSTIQK WGGIATVQDF SNYEVNLEKP LISTINNYTF YTSNGISSGL GLLAGLNFFD 360
  361 RVFNESDDDT LFTHKLVENF KWLSSIRTRF GDIDNRQDLI DKYTNSTWID DVLDEKKYSD 420
  421 EKTFHWKHYD PKYDIAEPQG TSHFSVVDEN DNSVAMTTTV NLLFGSMIYD SKTGIILNDE 480
  481 MDDFALPNVS NAFNLTPSIF NFIHPGKRPL SSTAPTIIIN DATNSTDFVI GAAGGSRITS 540
  541 AILQAIVRTY YRKYDLLSTI AFPRLHHQLI PESVMSENLT VWDQEHTGIA SSMKKLGHTF 600
  601 LETGSLTAMN GIKRVKGGKL HGVSDWWRKR GESDGY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle