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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.13467, orf...
Protein type: Transmembrane
Type Confidence: 0.74
Topology Confidence: 0.41
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSSQGNDIL KFPILNIQED MDYPVPFQDP YQLALFSQNK QLLIAKRKLV VIKGSIIMKV  60
   61 LTYEEDIVTA TYTHFSNSQE LEEVLVVSLK KHIHVYYPDG KSYVCSLPFA LKNALPFESG 120
  121 LVLQRDQNES LIPHNGALYS NTSHLNSAAI LTLVDPMGDF RIVATASTSV ISSKEEVMTF 180
  181 PRKDMSKVCS LCVTFNASDG SISIYHVKAP SRTTTFGKTQ SARNQKRRYG SITTPNPSRI 240
  241 LEEENGTEPL HSISLNMEKK RTSTLLSDIS SVGRVSSDCH SLSQDFSGFK KDMILSRIES 300
  301 FGNRLQKDQL RIFNIWFEDQ EGVVIFNRIR KECAVLIYRN PSFSRHSSAF KTSCLDCIPL 360
  361 TSTKHEGNLI ILTEHQKFSI INPFLGVKSA SHTFGNKLKV RSLIDSYDSK LALKLIDGSE 420
  421 MIIKIVLEPS SELVKMCLMC FRYLSGSSIN HIMWMLWRSA YVEIKYADEW EAFVAALLSL 480
  481 IFPFSEGAQC VQNEITKLLP VAKRIHETSD VNYNLHDLIP YITISLHLIR EEIRLDSTKA 540
  541 KCLNNINLLL CQLTTWMGWP APWIKYYSIK PENIDPNTRF LSALILEAPP NLLRSLASLF 600
  601 TNNIVRYLTF SQLVEETETV DLLVTPRTFY VLKLFEVLVS SQYGPSAIVS LMLEFGITKD 660
  661 LLETYPLGIS IPLKEALSIC QESPEFEWTS QTLDLVGRKD LNKLFLDADF SADINTEPHT 720
  721 STKDLSSLLN EVLEDNENFS PWDGQSEAER MNITKLIFEA DRRYFEITTL LHQTKTQTAY 780
  781 LKVDENVTEY DLVLQQRELA VIVALRTLTI PLGRAALVYA SRNPLLTEKF PIPKFNLNTL 840
  841 ISPTMTNIVY SEDRVSKSFS EWGHFHNGVS SGLSIGPFAK GISGSWIIFN KPPELNAQHA 900
  901 GFLLGLGLNG HLKRLEEWHI YNYLGPKHPL TSIGLLIGMA ASLRGTMDNK LTKVLSVHAV 960
  961 ALLPQGANDL NVPTMVQTAG LIGIGLLYLE SQHRRMSEVL LSQITASVLQ NDTEQVHEGY1020
 1021 RLAAGIALGF VNLGKGDDLR GLNDTHVIDK LMALAIAMKD YHPVQESGKS CCGAIMALAF1080
 1081 IYLKTENVNV ANKLKLPETE QMLDYIRPDL LFLRCLAKNL IMWNEISCTD TWVASQMPSS1140
 1141 VAHKYMSGNG HEVAFEHLDG DQLTYFNVLG GACLSMALKF ASSHNLEARD TILKYLDKVM1200
 1201 QLSAKPALNY DQKIAYKGCV NLQNILALCA SVIMAASGDL EVFRRLRVLH NDTNKKMGFG1260
 1261 CFMAINTALG FLFLGGGQYA FDSSPFAIAC LVTSLYPIYP TENSEYEIHL QALRHFWALA1320
 1321 IQPRCLIVRD ISTGRPCKIP VAINMKDDSV IESISPCLLP DINEILTLKT NSSAHFEVIL1380
 1381 DFSLNSEVLE KFKQSLTLYV EKSNNHSVLK PNVRSVLQNY SQPVRPEEDT TDILSPQMLD1440
 1441 NLDEKVKAAW YRENTNHVES DLRSSSVRSG LSVFNIIDNQ LELINNAQTP KSVEDIWNLK1500
 1501 LLFEYANHIA RNNKLNYISL EFIEGLKHKL WRVRN

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