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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.13439
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGLKNRKST INKDQNAKKT SSSKVADKNE LKDPVETTSF DTEDKITKPI LQDEPQKHHH  60
   61 HHHPHHEHDH DNDNDHDHDD KESTSMSRTD SLQKKTHSKK LKHHQKKKLS ESRRVMFIFG 120
  121 ALIGLILAAL FTTNSESFTK DLDKLVNLDQ FSDIFDDWKD LKNLKGLLPN GIQSFLQDKG 180
  181 VNTQDDGFNG SAESFSVGLR LENSKNFTAD HNVVMVPGVI STGLESWGTT TTGDCPSIGH 240
  241 FRKRLWGSFY MLRTMVLDKT CWLRHIMLDT TTGLDPPNIK VRAAQGFEAA DFFMAGYWIW 300
  301 NKILQNLAVI GYGPNNMISA SYDWRLTYID LEKRDGYFSK LKAQVEIVKQ LTGKKSVLVG 360
  361 HSMGSQIIYY FLKWVEAKGE YYGNGGPNWV EDYVEAFVDI SGSSLGTPKA IPALISGEMK 420
  421 DTVQLNALAV YGLEQFFSRR ERVDMLRSFG GIASMIPKGG DKIWGNLTYA PDDEIVAFDT 480
  481 EKEDIGEKKR SFGSFIQYKT ANDSSREVTI DQSIEELLEN SPDWYSKRVR ENYSFGVAHT 540
  541 KEELEKNNHD QSKWSNPLEA ALPNATSLKV YCFYGVGNPT ERAYKYMPAD KSTKLDYVID 600
  601 ADSPDGVVLG DGDGTVSLLT HTMCHEWQKG DKSRYNPANV NVTIVEIKHE PDRFDLRGGA 660
  661 KTAEHVDILG SAELNELVLT VAAGKGHTIQ NRYVSNLKKI VENMHL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle