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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.7500
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MINISRLAGY NKQDVKNILL LLHEFITTYR DNKVKLNYQS RPVILFFSTL IATAGFGLYF  60
   61 TFRNIITKYN EYALNKKLRR PSLIRQSSNI LKNGAREIYI PKGKNKVTRI IIPKPNNDQY 120
  121 AADKYLYKDF VRNQRILQQQ QKGVIFNSKF LNQLMIIWKI LIPKFYCQNT SLLVSQCFFL 180
  181 IFRTWLSLLV AKLDGQIVKN LIAANGRKFS RDLIYWLLIA FPASYTNAAI KYLDLRLALG 240
  241 FRTNLTRYIH DMYLDKSLVT QAYYKIGLNN SDILNIDQYI TDDVTNFCQS LCSLFSSMGK 300
  301 PFIDLIFFSV YLRDNLGTGA IIGIFANYMV TALMLKRATP SFGKLSSQRA HLEGIYYNQH 360
  361 LNVMTNSEEI GFYKGSLIEK FKLNENFQKL IQHISKEINI SFGYAALEDY VLKYTWSAWG 420
  421 YIFAGLPVFL DELWPKEAVA LTGDDDDDDI AAVIAKKKKQ KQQDGKDAQV DSATEGKNMR 480
  481 QFITNKRLLL SLADAGSRLM YSIKDVNTLT GYTDRVFNLL TQLHRVHAPK FDYGDKNGYA 540
  541 DIQGTIQDNY PDGLRFENIR VIIPTAEGSE YAPLVDNLNF QLKHKSMLIL GSNGCGKTAI 600
  601 ARIIAGLWPL YSGLLSKPND DDIFYLPQKA YFTTGNLRDQ IIYPHTYTEM LEMGYNDDYL 660
  661 YHILREVKLE YLLKREKSLN TVKTWSSVLS GGERQRLSIA RALFKHPKLI VLDDCTNAVS 720
  721 TDVEEYLYEL LIKKKLTFIS LSNRPSLEKY HDHVLEIEEG DWKLKTVH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle