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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.2615, orf1...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIGMNRLIFS KAFTSSCKSM GKVPFTKSIT RANTRYFKPT SILQQIRFNS KSSTTPNTEA  60
   61 NSNGSTNSQS DTKKPRPKLT SEIFKLLRLA KPESKLIFFA LICLVTTSAT TMTLPLMIGK 120
  121 IIDTTKKDDD DDKGKDNDDK DDTQPSDKLI FGLPQPQFYS ALGVLFIVSA STNFGRIYLL 180
  181 RSVGERLVAR LRSRLFSKIL AQDAYFFDLG PSKTGMKTGD LISRIASDTQ IISKSLSMNI 240
  241 SDGIRAIISG CVGLSMMCYV SWKLSLCMSL IFPPLITMSW FYGRKIKALS KLIQENIGDM 300
  301 TKVTEEKLNG VKVIQTFSQQ QSVVHSYNQE IKNIFNSSMR EAKLAGFFYS TNGFIGNVTM 360
  361 IGLLIMGTKL IGAGELTVGD LSSFMMYAVY TGTSVFGLGN FYTELMKGIG AAERVFELVE 420
  421 YQPRISNHLG KKVDELNGDI EFKGIDFTYP SRPESGIFKD LNLHIKQGEN VCLVGPSGSG 480
  481 KSTVSQLLLR FYDPEKGTIQ IGDDVITDLN LNHYRSKLGY VQQEPLLFSG TIKENILFGK 540
  541 EDATDEEINN ALNLSYASNF VRHLPDGLDT KIGASNSTQL SGGQKQRVSL ARTLIRDPKI 600
  601 LILDEATSAL DSVSEEIVMS NLIQLNKNRG VTLISIAHRL STIKNSDRII VFNQDGQIVE 660
  661 DGKFNELHND PNSQFNKLLK SHSLE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle