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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.5736
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIQQFTLLFL YLSFATAKAI TGIFNSIDSL TWSNAGNYAF KGPGYPTWNA VLGWSLDGTS  60
   61 ANPGDTFILN MPCVFKFTAS QKSVDLTADG VKYATCQFYS GEEFTTFSSL KCTVNNNLRS 120
  121 SIKALGTVTL PIAFNVGGTG SSVDLEDSKC FTAGTNTVTF NDGSKKLSIA VNFEKSTVDQ 180
  181 SGYLTTSRFM PSLNKIATLY VAPQCENGYT SGTMGFSTSY GDVAIDCSNV HIGISKGVND 240
  241 WNHPVTSESF SYTKSCSSFG ISITYQNVPA GYRPFIDAYI SPSDNNQYQL SYKNDYTCVD 300
  301 DYWQHAPFTL RWTGYKNSDA GSNGIVIVAT TRTVTDSTTA VTTLPFNPSV DKTKTIEILQ 360
  361 PIPTTTITTS YVGVTTSYST KTAPIGETAT VIVDVPYHTT TTVTSKWTGT ITTTTTRTNP 420
  421 TDSIDTVVVQ VPLPNPTTTT TQFWSESFTS TTTITNSLKG TDSVIVREPH NPTVTTTEFW 480
  481 SESYATTETI TNGPEGTDSV IVREPHNPTV TTTEFWSESY ATTETVTNKP EGTDSVIVKE 540
  541 PYNPTVTTTE FWSESYATTE TITTGPLGTD SIVIHDPLEE SSSTTAIESS DSNISSSAQE 600
  601 SSSSVEQSSS IVGLSSSSDI PLSSDMPSSS STGLTSSESS TVSSYDSDSS SSSELSTFSS 660
  661 SESYSSSISD TTNFWDSSSS DLESTSITWS SSIDAQSSQS VQSVSNSIST SQETTSSSGE 720
  721 ESNTSVTDIL VSSDASSILN SDISSYYPSS TISLSDDFPH TIAGEPDSRS SSSIASTVEI 780
  781 SSDLVSLTSD PTSSFDSSSS LNSDSSSSPF SDESDISASS SFSTLVAPSF SLSSSSSLSL 840
  841 IYPHYVNSTT YHASESESSS VASPSMASES ANDDTHTLSE STDTTSSIGT DSSTVTFCRR 900
  901 DNGDGCIVTG IPSSSIDSEQ TSDVTTTSSF VASSTPTSAE QSITDNPNID SSQTSASSST 960
  961 KSSVSVSDTV VNSILLSETS TLSSDDSTSS DTSISSTTNS DTGNINAGSS HTSTASIKES1020
 1021 SIQKTGVTLS SSYLSTKLSS TSDITIELIT TELITTELTT IEDNEPNTFT STPSSHSEIF1080
 1081 SSDNSVLSKQ VDRESTIKTS PTTDVTTVSS LSVHSTEAST ATLGENSFSN VASTPSNIAT1140
 1141 SLRSTSSSSN HATESSGTVK SEASAETIPS PPTSTDNRLS YSTEEAKGIT YANSGSTNNL1200
 1201 INESQVAAPT DSTSVLIENP VVTSTFDDNS SAAVDQPSKT KSIEESIMNP DSTNETNNGF1260
 1261 IATLSQAQVP SSSIHSELIS TTTAKTTDAS MNGDSAASNS QPTTLIQQVA TSSYNQPLIT1320
 1321 TYAGSSSATK HPSWLLKFIS VALFFFL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle