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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.3282, sp|Q...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFESDLSFYS ALLILCCPIS IVFFKKFPIK GYTGANKVSL FLQCLIAILN LNILYSFINS  60
   61 LTITLGHDGS SANTLTIDPI TTTQQQGHVD YTPIKVSGYT FKNQVATKNL QCDSIVYDQD 120
  121 LDLQVSQAVD LNKPEDLKFF RDKLNELRSL NNIYDLFFQD NEDEVEESIL ERKWYKFCGS 180
  181 AVWLDKYGVY FMVNRIAYSK KGTRNNPTIS VLAGQVFDKN WIELTGKKFP FSGLEFPTIL 240
  241 PHYIDEGKEA EKVILGAEDP RVILHEYTNE NGIRIQEPLI AFNALSTEVD WKRAMHIYRP 300
  301 LHDPHRIIRL SIENYAPREK EKNWAPFIDG NNLNFVYNFP LRILRCNINN GDCQKVSGPD 360
  361 FNDKSHENAG KLRGGTNLVE IPSQSLPKHL RSRKYWFGIA RSHITDCGCV GELYRPHLIL 420
  421 ISRNKKSDQY ELNYVSDLID FNVNPEPWTP GKTTCSDGKS VLIPNSVAFI KDDYMSVTFS 480
  481 EADKTNKLIN AKGWLTYITK MLEFTQERLK DESSDPVLES RLLSKCSTFL AQQYCALSKD 540
  541 TMGWDKLSR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle