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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.5426, orf1...
Protein type: Transmembrane
Type Confidence: 0.73
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSEVTLVPT VSTTSSDAII KELFQQYISL HPNDNTTSNN NKQTERTGFS LRSLPIIGNF  60
   61 FPEMDDKKKA INELLEIQKV TTSYREWYDT SLKLDELLGN NAWKSDPKSD IYDYDLIYKN 120
  121 LNEMRRARLN HDYKLLLYYI RTKWIRNIGN MGDANLYRHA YVGTKKLIEE YVRECQLSLE 180
  181 YLVTNDEVNL NDRYLLGMLI QTRKNIGRTA LVLSGGSTFG IFHIGVLTTL FEANLLPRII 240
  241 SGSSAGSIVA SILCCHNNEE TFELLSTITT KKFNIFDVVD CDTSQIQGSF KKVLYYLGHW 300
  301 IQYGTIFDIE GLQDTMIGFL GDLTFREAYN RTGKILNITV SPASVHEQTR LLNYLTAPNC 360
  361 LIWSAVCASC SVPGIFPSCS VYEKNPKTNE IHEWNNDESM KYVDGSVDND LPITRLSEMF 420
  421 NVDHIIAVQV NPHVVPILRV SVSNIGGQVE NDLIYKMKHL LNNVYDFVSC EAIHYLQLLN 480
  481 ELDVYKNLSN KMISILSQNY SGDITIIPEY KMSDFVNLFE NPDTEFMLDF ICRGAKVSWP 540
  541 KVSIIHNHCS VEFALDKAIT ILRGRIITSA NYRITSNSSG VRRSQSYYKP KQQIMNLVTS 600
  601 PVMNDSTQFN TAPATPLKQK QRPLGVQRHH STSNTISNKH QPRSKRNSMS ATDGGQAEAV 660
  661 AAAYSTVGGA TTPQKKLLKG ISTTALVQLT QGYVSGDSTL VNDDSENSNG PATTTRRGIR 720
  721 KARSSGNIRN NMDYNNADRP VSRSTIDRIP YKNNPYLQQR SKESLESFSK AEEGLSQRKK 780
  781 PNLPSVSRSN SHRNSYIGLN RLKDNNLSKQ NNNSYYNLKQ LGKGPNNQEL INKLEQERKG 840
  841 ILKNGNRESI ANLELFANSD DDDLCKLELS HDSSLGDDEH SNEKEYTPGD DDDDDDDSDE 900
  901 EDSQSHSDEE EEDYGEKANG SSLKVAFESV EMTNRSESVV DDIDPYFGN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle