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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.5110, orf1...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPIPRSFIFE PELEQLLKRD ENGCVSCPSS AGSCPSCPSG QQCQLSSRTC NSCPKYYCAS  60
   61 VSSKKGSPIG GIVGGVIGGV AFLALVGAVL YYFLIYRKKH PLILDEDFEN YEDDEDFLED 120
  121 ETSGYASSKL TSNNGNGLDV SSPGYDSSSG NVVSPVSASN VNTTNGSSSN GPNTTVSSTS 180
  181 VGNTSVERAA GPGVGSGAAI VARKQIAGNS VSAAKRRQMK RLSSYESFTR PKASGNNKAK 240
  241 QQQLQARRAR QQRIIRQANQ QTQQQPQQQL PFNQYLQPSN RNSVATSFSN ASNILPIAYI 300
  301 PGVTVRPTKN NTRSIYSYDT DSLFSDLNTI ENASIIGDVV LANQNTATAE MYNPSPESSV 360
  361 RSENQQSQQR NYTNGPGTMT AIKAQPRLVN VDKIEEEDED EEDSEEDYDE GRAIPEESEE 420
  421 DSDVDSDIGE ITRATSLKRQ QPGPQASNNI DGDKQIDIAP GDSTENGIPL DYINFDNGKD 480
  481 VGSTINSATG SFLLNVEFDH SPLTTPVKTH YTDNSNDRGS PFADPDK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle