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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76573700
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNPFDSGSD DEDPFLSNPQ SAPSMPYAAY TSDRTSPRKT YQPLNFDSED EDAKESEFMA  60
   61 FPSSTSGSPF HQQQSPRQSP NIFSRSTARA ATSKSNMSIY DNTPNLQFNK SGAATPRAQF 120
  121 TSKESPKRQK TTEVTIDFDN DDDNNHTLEF ENGSPRRSFR SSAISSERFL PPPQPIFSRE 180
  181 TFAEANSREE EKSADQETLD EKYDYDSYQK GYEEVETLHS EGTAYSGSSY LSDDASPETT 240
  241 DYFGASIDGN IMHNINNGYV PNREKTITKR KVRLVGGKAG NLVLENPVPT ELRKVLTRTE 300
  301 SPFGEFTNMT YTACTSQPDT FSAEGFTLRA AKYGRETEIV ICITMYNEDE VAFARTMHGV 360
  361 MKNIAHLCSR HKSKIWGKDS WKKVQVIIVA DGRNKVQQSV LELLTATGCY QENLARPYVN 420
  421 NSKVNAHLFE YTTQISIDEN LKFKGDEKNL APVQVLFCLK ESNQKKINSH RWLFNAFCPV 480
  481 LDPNVIVLLD VGTKPDNHAI YNLWKAFDRD SNVAGAAGEI KAMKGKGWIN LTNPLVASQN 540
  541 FEYKLSNILD KPLESLFGYI SVLPGALSAY RYIALKNHDD GTGPLASYFK GEDLLCSHDK 600
  601 DKENTKANFF EANMYLAEDR ILCWELVSKR NDNWVLKFVK SATGETDVPE TIAEFLSQRR 660
  661 RWINGAFFAA LYSLYHFRKI WTTDHSYARK FWLHVEFIYQ LVSLLFSFFS LSNFYLTFYF 720
  721 LTGSLVSYKS LGKKGGFWIF TLFNYLCIGV LTSLFIVSIG NRPHASKNIF KTLIILLTIC 780
  781 ALYALVVGFV FVINTIATFG TGGTSTYVLV SIVVSLLSTY GLYTLMSILY LDPWHMLTCS 840
  841 VQYFLMIPSY TCTLQIFAFC NTHDVSWGTK GDNNPKEDLS NQYIIEKNAS GEFEAVIVDT 900
  901 NIDEDYLETL YNIRSKRSNK KVALGHSEKT PLDGDDYAKD VRTRVVLFWM IANLVFIMTM 960
  961 VQVYEPGDTG RNIYLAFILW AVAVLALVRA IGSLGYLIQT YARFFVESKS KWMKRGYTAP1020
 1021 SHNPLN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle