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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.8589, orf1...
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLFLTIIFI IASVNAVKEY LFKSCSQSGF CNRNRHYATE VSNCENFQSP YSIDSIKVDN  60
   61 DTITGVVFKH LPQLDHPIQF PFEISILEGN FRFKLTEKEN LVAKNVNPVR YNETEKWAFK 120
  121 QGVTKSSDFD VSLRDNEARV IYGDHEVLIQ YHPIMFVFKY AGKEQLRIND KQFLNIEHRR 180
  181 TRDENDNNML PQESDFNMFS DSFQDSKFDT LPLGPESIGL DFTLLGFSNL YGIPEHADSL 240
  241 LLRDTSSGEP YRLYNVDIFE YEPNSRLPMY GSIPLVVAAK PDVSIGIFWL NSADTYVDIH 300
  301 KSKSSTVHWM SENGILDFIV IIEKSPAMVN SQYGKVTGNT QLPPLFSLGY HQCRWNYNDE 360
  361 KDVLDVHAKF DEYEIPYDTI WLDIEYTDEK KYFTWHKENF ATPEKMLREL DRTGRNLVAI 420
  421 IDPHIKTGYD VSDEIIKKGL TMKDSNNNTY YGHCWPGESV WIDTLNPNSQ SFWDKKHKQF 480
  481 MTPAPNIHLW NDMNEPSVFN GPETSAPKDN LHFGQWEHRS IHNVFGLSYH ETTFNSLLNR 540
  541 SPEKRPFILT RSYFAGSQRT AAMWTGDNMS KWEYLKISIP MVLTSNVVGM PFAGADVGGF 600
  601 FGNPSSELLT RWYQAGIWYP FFRAHAHIDS RRREPWLAGE PYTQYIRDAI RLRYALLPLF 660
  661 YTSFYEASKT GTPVIKPVFY ENTHNADSYA IDDEFFIGNS GLLVKPVTDE GAKEIEFYLP 720
  721 DDKVYYDFTN GVLQGVYKGG KKPVQLSDIP MLLKGGSIIP MKTRYRRSSK LMKSDPYTLV 780
  781 IALDEEGSAS GKLYVDDGET FAQGTEVAFT VDNNIINAKK IGPTASIPIE KIIIASKDQT 840
  841 TTLNNPKLDI NSDWSLPFSF DSHRKIEHDE L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle