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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.932, orf19...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKNKHNFTL NNSSDGVNNN DDPSDHHDYS DDSMPPTPTI STFNKFPRQS SLRFKTPLPN  60
   61 DTPRSSSSGS TSNNNNHNHN QKSPFLDENE ASFDRKFGYN YDKDKVVEEE DENEDEATYV 120
  121 VGEDNEDNED ENDNINEMDP SNLKTKRHRW GTTRHKHGRP KNENINRSKT LKKILAPHKS 180
  181 KGKSHSKNSH SLNKRLLSIR KPNTHRVNFP HDNQPPPQDL DFEEQNDPKN RKSEKRTVTF 240
  241 NRPLPPHLVD PETNKPLTNY PRNKIRTTKY TPLSFFPKNI WNQFMHNVAN IYFLVLIILG 300
  301 AFEIFGVPSP VLAAVPLIVI VIITAIKDAI EDSRRTVTDL EVNNQITHIL TQVNEDAANG 360
  361 YHYENVNVDD EQVSYWRQFK KWNTRLLIRF WGASKRNLTK EGRANKIRER YNRENNIDGD 420
  421 GDQQQGRKSF DSDIVSNRTS FEQTENPFND TLRQSFQQQR QQQQRQSSSY RHKTMKFAKK 480
  481 YWKDVKVGDV LRIYNNDEVP ADLVILATSD EDNCCYVETK NLDGETNLKV KQALKYSSIN 540
  541 EKIHKADDLI NHDFEIDSEG PHANLYSYQG NLKYTNRMNN SQSYDNHEDS QEAITINNLL 600
  601 LRGCTLRNTK WAIGIVVFTG DDTKIMLNAG VTPTKQSRMS RELNYYVLLN FILLFVICFI 660
  661 SGLVNGIYYR ETNTSRDYFE FGTIASTPAL NGLVGFFVSL ILYQSLVPIS LYITIEIIKT 720
  721 AQAFFIYSDV GMYYSKLDFP CTPKSWSISD DLGQIEYIFS DKTGTLTQNL MEFKKCTING 780
  781 VSYGKAYTEA LAGLRKRMGI DVEIEAAQER ELISRDKEVM IEKLHTINKN KTYDDEITFV 840
  841 SSEFIDDLTD SSINNQSQRE SNHHFMLALA LCHSVMTEPD PKQPNKLMLK AQSPDEAALV 900
  901 GTARSLGFNF KGTTKTGVIV DVHGETKEYQ VLNTLEFNST RKRMSSIIKI PGEGPNDEPR 960
  961 ALLICKGADS IIYERLSATE NDPSMLEKTS KHLEEYATEG LRTLCIAERE LSWKQYVEWN1020
 1021 KRHQAAASSL DDREAKMEAV ADSIERELTL LGGTAIEDRL QDGVPDAISI LADAGIKLWV1080
 1081 LTGDKVETAI NIGFSCNLLG NDMQLLVIKT AYNDDENGSN DDNSSEDKNS LQGLKFGHNA1140
 1141 SEPEIVDTVI SYYLRKHFDM TGSFEEKEAA VGDHSPPDER FGVVIDGDAL KLVLLSPDVK1200
 1201 RKFLLLCKKC RAVLCCRVSP AQKAAVVKLV KDTLNVMTLA IGDGSNDVAM IQAADVGVGI1260
 1261 AGEEGRQAVM SSDYAIGQFR YLARLLLTHG RWSYKRFSEM IPSFFYKNII FNIALFWYGI1320
 1321 YCDFDGTYLF EFTYLMFYNL AFTSLPVIFL GIFDQDVEAK VSLLVPQIYR TGITRTEMSD1380
 1381 LKFYLYCLDG IYQSAISYFF PYLLYMVAFP NMNGKPVDHR FWMGVLVTCI ACISCNCYIL1440
 1441 FHQFRWDWLS SLIVAISILI IFIWTGLWTV NYQSSGEFYK AAPEIFGMTA FWACMFVGIL1500
 1501 CCLIPRFFYD FVMRIFWPKD IDIIRECVAR GDFEAYPFDY DPTDPNRPKI STYSSDVVHR1560
 1561 MSMNYPSPPQ TQATSTDSNG KSPSSSSLDN GHQSRNSNNL NGNGYYDQDN SSGSNLTYDR1620
 1621 SIIFERVNES PINAHHQQPP TPPPGIIASP IRKRKGFVPS VFRNSSDSHI HHSNGHTNGS1680
 1681 SPGVATEEIP LEDFDDEQKR ASRISYENQK RVSSMN

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