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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ATG15_CANAL
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLEKNRHAN KGTSWTWMIY KFVVGVITVA ILVLFITQKS VSQAQDKLRV EQQAIFSDQD  60
   61 TLQLKHIFHH GTGPKNYRLH RRLDITSEYL AKHQPYFTTL TQQLSEPVLE EHIASDNLDK 120
  121 IYQQSDWPEI HKGKNPFSIE LPFKKADSEA TRLKERNTLN FIESYLNYAR DIKGDAQILN 180
  181 RINLDWIHDE IKVPNVTDRD TVVTLATISS NAYVRYPKDD DEKRKSDWID LGDWDPNRED 240
  241 DDVNFGWDDI GLRGHVFVSK DNKTVVIGIK GTSGAGLPGG GSDETGGNDK TNDNLLFSCC 300
  301 CARISYMWTT VCDCYEKTYT CNQDCLEKEL RKEDKYYQAV LELYRNVTDI YPPESTDIWV 360
  361 TGHSLGGALA SLLGRTFGLP AVAFEAPGEM LATRRLHLPS PPGLPQHMEN IWHFGNTADP 420
  421 IYMGVCNGAS STCNLAGYAM ETTCHTGLQC VYDVVTDKGW SVNLLNHRIH TVIDDIILTY 480
  481 NETAPCAPSP PCRDCFNWRF VAHDDNEKDE PKLPNPLRSS SKSTLSTKTT SLKSSSTYSG 540
  541 STSSSTVTKT TQTSPISSAS PTDQDPPKKC LKRTWYGWCT KWGYDDDDDD EDTFERK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle