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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.3409
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPKDSASID VGYPIMGIKF LNNKTILVAG GGGEGNNGIP NKITAIKSSF KVKDPNRKLQ  60
   61 RFREITLPSN EDSPQCIDTA KLVGENKFNV VLGCNQSSQL IKSMNINNNI RKYEYTNEEH 120
  121 LRFVDAAQFE AEINGDADDY PKIVRLAQNN NVGCFMTSTV PSSIYIFNPE TLELNYKFIP 180
  181 DKSIEIKDFV LSPHDGNSLC YITSNSINVV ATNNTSNVEL SSVSIPNLDK QLKGYVLSKV 240
  241 RYINSDELLL AATFVGKKGA VLLRLNIPNK KIIQTQVISK KGVIVSMDVS PTKVAVATND 300
  301 LALTLINLSN LKVLKAFKNL HPWAITSVSF SPSGDKVASA SASGTLVVSK ISSIGRSGGS 360
  361 GWFLSVLLAL VFGIVAILAA VFPDFVTQLT GQSSLIDYKS FDFAVPVSIV AERYSSIVSQ 420
  421 FLDTKSTTVS SVESKILDNT PSAEIPTTES TFLQSVDHQD PIIDSSKVES ADVETTVIEV 480
  481 VVEETTVVEN SSVETSIIPS EVREAHTEKS SSIEESHVPS TFIESDVVSS TETSSSVESL 540
  541 VESPVVESSE EETPIVESSP VQPPIIEESS SFELEFSEST TETQVVQSSI IESVEEESSL 600
  601 EGTTIIESQS VEPPVVESSS SEISSVESFS SEPANVESSS TASSVLESSS VQASYIESPS 660
  661 VESLPVESIS VESPSTESPT AESMSVGVSS TEVSSSESPS TDPSSESPSP DVSTVESARV 720
  721 ESFSVENPSV ETSSVETPST ETPSTETPLT ETSSTEPSSA EIPAVESISS ESLSVETPSI 780
  781 EVSSAESHSV EPNVTESLSV QSSTAESDTA PSSITSASTK KARVKRTITK KVTRTIKKDE 840
  841 L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle