YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PBN1_CANAL
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRQRTTIYNP YSSHDGIITN LNRTNFQLSS IPNHLFTIEN KYTITITTTQ PNKSSLYSAI  60
   61 KELRIQTKFN NNESGIPIFS FHYKPGLNIY AVPQSNVDKL EFWQQVEQLI MELLGIKLSS 120
  121 QQWIANVNSF YYHDIQPQPL LNLNLNLNLK EGWKFNLHPK SNYDYIYNQD KIIIRELLTN 180
  181 VSEIEFNLES GIYKEIGLFL IDDKISTNDD LNLSGIRVIL DEDSNTNNKE ESIHKTMFHI 240
  241 KPRHRSFDDS TTITTTKIIP QGLHPILSTE LNTTTIVMPT DFDVEECKFY YYLNLNKSLI 300
  301 FDQFQNIPIG SQLIINNGNK NLELPEYKIN QWGNELLFEF EFDNDNDIPH HINLTVHSRY 360
  361 QLPQNNHSHS HSQISNVLNS LPNIFMGCNV KEGNLLDKSP FDTKRDVKIG GNYEIYFTED 420
  421 TVFYHLQNSD NSDNSGSSTL LEINIPHGKT TFDRVNNITS LGLLIGVLMI LYAISIRVFM 480
  481 STTSKTKRD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle