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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.7363
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASQRDLTSN NPHFHISSSR NNTNDDFNSD HNPRNPFGDE PEEEEELDSA SFSSSSQNNQ  60
   61 PHHPFATSNQ TSSTNNLHST NSIRNEAEYG KPFQAYSGYY SNGGSSSYLN QEGVISDESR 120
  121 LLSSGNNNNN NNNNRDVSSV GGGGGSGDNR LNPTSPAEFD RYPSMAGSRV VSSTSLVSFN 180
  181 NPSNMMRNHH QHQPHLGSSS SPTSSSMNND SISDKSTSPF PNDFSPFGGY PASSFPLSID 240
  241 EKEPDDYLHN PDPVQDAEYE KNRFMHDLKN MDKRSLGGLI GFIILFIAAL AVFIILPALT 300
  301 YSGATNPYHP ESYEVLTKYS YPMLSAIRMN LVDPDTPESA YKKKAKDGSE WVLVFSDEFD 360
  361 AEGRTFYEGD DQFFTAPDIH YDATKDLEWY DPDAVTTANG TLNLRMDAYK NHNLFYRSGM 420
  421 VQSWNQLCYT QGHLEISARL PNYGNVTGLW PGLWSMGNLG RPGYLGSTDG VWPYSYDSCD 480
  481 AGITPNQSSP DGISYLPGQR LNKCTCPGEL HPNRGVGRGA PEIDVIEGEV MTDSSGKKEN 540
  541 CGVASQSLQL APMDIWYIPD YNWVEIYNFS VSTMNTYTGG PFQQALSATT MLNVTWYEFG 600
  601 DNAHNFQTYG YEYLNDPETG YLRWFVGDDP TLTVYSQALH PDGNIGWRPL SKEPMSLILN 660
  661 LGISNNWAYI DWPSISFPVT FRIDYVRVYQ PPDQINVGCD PTDFPTYDYI QQHLNLYENA 720
  721 NITSFEDGGY KFPKNSLIGC 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle