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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.5255, orf1...
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIENSKLQK NSLALSLLKV YKSNRSLLLN TSYIILLTAA FAGATNTGKT SSSSRPPNKE  60
   61 DSQDEKELKK KSHKLSKESF NRLARAILPS FLDKSIFYLL ANLVLLVVRA LLTIKVATLD 120
  121 GQLVGALVSK RLKLFGRYLA YWMLLGIPAA FTNALLNWTK QNLSKTIRTN LNKNIMEEYL 180
  181 PDSLDANYYS LMHLSGNKIK DPNQRITTDV SRLSYALASL PGQLLKPTLD LILCARQLSK 240
  241 SGVGNGEGTL ALGLLAHFST MIIRFFSPPF AKLAAERANL EGQLRSAHSK IVSNNEEIAF 300
  301 LRGHYRELDY IDYCYYTLER FSKGEYWKKA IHEIAQTFIV KYFWGAAGLV LCSAPIFIGK 360
  361 YFGESDDKNA AGNFITNRRL LLSASDSLDR LIYSRRYLLQ IVGHASRVSD FLDTLDDVDR 420
  421 KKKTITANVK YNNNEITFDK VKLMTPADVT LIESLDFSIK SGDHLLIAGP NGSGKSSLFR 480
  481 MLGGLWPVKK GVITIPHTDN MFYLPQRAYL VEGTLREQII YPHALDQQKK TDNELKQILQ 540
  541 VLKLDHYFDQ LDSDKNWGEE LSIGAQQRLA MARLYYHKPK FAVLDECTST VSPDMEQFMY 600
  601 KHAQELGITV LSVAHRTALW HFHKYLLKFD GKGGYTFDKL DEETILKLQK EGSGLTKKPE 660
  661 NKSESTK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle