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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46437942, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.31
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASTNNLQQQ QVRRGQFTQA KLASSTIFKN LSMISFRVGV ILLFLYQIYN ILIVLNLHYH  60
   61 LGLTQDSSLN WIYRYIPDSL FQYDAEFFND TKYMKTPGAQ VMVGPTSDMY WPIFLTFCLS 120
  121 SFIETFIASI EGKKPYTESG ITIFEHSLAF QEFSSNGAFF FGSSKYYKRP TEQVLLTTLF 180
  181 SILNHLNIHI GAIINDNKYR LIPSTVFGMT FLGYFISSFT NGWGFLQFPL ILVLTFTPQV 240
  241 LILFIILISL AIFLLAVVVN GFRLRGLNYA SLFMRDSRNE LDEEDTNSLI KNLNINLNDD 300
  301 FYTALLNVGI LAITSAGRSS YITELSLVNL EDETWVDRSI WERLKWAGHS SRNGTSRGVV 360
  361 QYLQENQLVG YGNVIAKPTQ RLISGNYLGD YESSNIGGRT SVLKKRTLYL KDMIVYTWQL 420
  421 LYGLVVDSFI LEYIPNLFKK VVLGKKIEKR PYWEEETEDE FEKRKLKTPP FLRKYVTRRV 480
  481 SRKKKDLVNI DSFTQDEVSQ SYAKILLSTN DISEVDNSGD YNEVIEEETD LEYDSDVDEV 540
  541 VFTPGTVASR NPTFAQKQAI LPIHELFDGK ELHDVLVSSN TTYLDILQKH MQYGEENGRL 600
  601 TRSKYQSLAF SPSSSFQSTD KFLGRTEEDS ETARLLDILI SKRLEKGEQS SRDDDSARSL 660
  661 DCVICQTNVR EIITWPCKCF AICESCRLSL VSKGIEGCVC CRREVEGVSK IFIP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle