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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.6438, orf1...
Protein type: Globular with Signal Peptide
Type Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSIIVTTT TTTTTTTATA IAQQHYSALP LSAAWELLSS TFQEDFVTAL NNLEYIPGGS  60
   61 IILRYIKSSY QNDPIRSLLE FCLVLFALSY FLSSKKKENK SELVRFSRKE IDELCDEWEP 120
  121 APLVNEVTEL ENWELKSVPE IIGQNGAHVK LNNKTAVNLA SQDFLNLNEN DRIKESARVE 180
  181 IRSAGVGACG PPNFYGTQDV HVRLEEDLAR YLDSEQAIIY GQDFVTAGSV IPAFLKRGDL 240
  241 CVVDSGVNIA LQKALIVSRA DIEWYDHNDV DHLEQILSQL KPVLDRQKPI RRRFIITEGL 300
  301 FANSGDIANL PRIVELKNKY KYRLFLDESL SIGVLGGTGK GLPEHYGVSR DEISITIGSM 360
  361 ANSFASSGGF CVGVNPMVHH QRISSNAYVF SASLPPYSAK VTSQAIREIS APENLDPTTG 420
  421 KSKLMVQLHK KTVDVYDRLE AALEKLPMHI VSSPQSPMIH LRLREKVREQ LNLPLMYGNS 480
  481 TFITTGKPAK LLNEFDEYLN LESFILQKVI DYVLEHEGIL ITRSKLILEH ENLPVLPPHL 540
  541 LIMINIGVKE EELDRVVEVL PKAIENVFSN IKSEEDLLQL RDELVNY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle