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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.7414
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTVILLHLF FYCTIAMAKT ISGVFTSFNS LTYTNTGNYP YGGPGYPTWT AVLGWSLDGT  60
   61 LASPGDTFTL VMPCVFKFIT TQTSVDLTAN GVKYATCTFH AGEDFTTFSS MSCVVNNGLS 120
  121 SNIRAFGTVR LPISFNVGGT GSSVNIQDSK CFTAGTNTVT FTDGDHKIST TVNFPKTPQS 180
  181 SSSLVYFARV IPSLDKLSSL VVASQCTAGY ASGVLGFSAT KDDVTIDCST IHVGITNGLN 240
  241 SWNMPVSSES FSYTKTCTPN SFIITYENVP AGYRPFIDSY VKKSATATNG FNLNYTNIYN 300
  301 CMDGKKGNDP LIYFWTSYTN SDAGSNGAAV VVTTRTVTDS TTAITTLPFD PTVDKTKTIE 360
  361 VIEPIPTTTI TTSYVGISTS LSTKTATIGG TATVVVDVPY HTTTTITSIW TGSATTSSTY 420
  421 TNPTDSIDTV VVQVPSPNPT VTTTQFWSGS VPTTETVTTG PQGTDSVIIK EPHNPTVTTT 480
  481 EFWSESFATT ETVTNGPEGT DSVIVREPHN PTVTTTEFWS ESFATTETVT NGPEGTDSVI 540
  541 VREPHNPTVT TTEFWSESFA TTETITTGPL GTDSIVIHDP LEESSSSTAI ESSDSNISSS 600
  601 AQESSSSVEQ SLTSADETSS IVELSSSSDI PSSSIGLTSS ESSTVSSYDS YSSSTSESSI 660
  661 ASSYDSYWSS SIESSTLSSS DRYSSSISDT TSFWDSSSSD LESTSITWSS SIDAQSSHLV 720
  721 QSVSNSISTS QELSSSSSEE SSTSATDALV SSDASSILSS DTSSYYPSST ISPSDDFPHT 780
  781 IAGESDSQSI SFITSTVEIS SDSVSLTSDP ASSFDSSSSL NSDSSSSPSS DQSDILTSSS 840
  841 FSTLVVPSFS LSSSSSLSLT YPHYVNSTTY HASESESSSV ASPSMASESA NDDTHTLSES 900
  901 TDTTSSIGTD SSTVTFCRRD NGDGCIVTGM PSSSIDSEQT SDVTTTSSFV ASSTPTSAEQ 960
  961 SITDNPNIDS SQTSASSSTK LSVFVSDTVV NSISLSETST LSSDDSTSSD TSISSTTNSD1020
 1021 TGNINAGSSH TSTASIKESS IQKTGVMLSS SYLSTKLSST SDITTELITT ELTTTELTTI1080
 1081 EDNEPNTFTS TPSSHSEIFS SDNSVLSKQV DGESTVEIPP VTDTTTVSSV SVHSIEASTA1140
 1141 TLGENSFSKV ASAPVNTETS LRSTSSSSNH ATESSGTVKS EASAEAIPSP PTSTDNRLSY1200
 1201 STEEAKGSTY ANSGSTNNLM TESQVAAPTD STSVLTANPV VTSTFDDKSS AAVNQPSKTK1260
 1261 SIEESIGSLD SVNETNNGFI ATLSQSEAPN SLIHSESIST TMAKTTDASI NGDSAASNSQ1320
 1321 PTTLIQQVAT SSYNQPLITT YAGSSSATKH PSWLLKFISV ALFFFL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle