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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.7400
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKLYLLYLL ASFTTVISKE VTGVFNQFNS LIWSYTYRAR YEEISTLTAK AQLEWALDGT  60
   61 IASPGDTFTL VMPCVYKFMT YETSVQLTAN SIAYATCDFD AGEDTKSFSS LKCTVTDELT 120
  121 EDTSVFGSVI LPIAFNVGGS GSKSTITDSK CFSSGYNTVT FFDGNNQLST TANFLPRREL 180
  181 AFGLVVSQRL SMSLDTMTNF VMSTPCFMGY QSGKLGFTSN DDDFEIDCSS IHVGITNEIN 240
  241 DWSMPVSSVP FDHTIRCTSR ALYIEFKTIP AGYRPFVDAI VQIPTTEPFF VKYTNEFACV 300
  301 NGIYTSIPFT SFFSQPILYD EALAIGADLV RTTSTVIGSI TRTTTLPFIS RLQKTKTILV 360
  361 LEPIPTTTVT TSHHGFDTWY YTKKATIGDT ATVFIDVPQH TATTLTTYWQ ESSTATTTYF 420
  421 DDIDLVDTVI VKIPYPNPTI ITTQFWSGKY LTTETHKEPP LGTDSVIIKE PHNPTVTTTE 480
  481 FWSESFATTE TITNNPEGTD SVIIKEPHNP TVTTTKFWSE SFATTETITN NPEGTDSVII 540
  541 KEPHNPTVTT TEFWSESFAT TETITNGPEG TDSVIIKEPH NPTVTTTKFW SESFATTETV 600
  601 TNGPEGTDSV IVREPHNPTV TTTEFWSESF ATTETITNGP EGTDSVIIKE PHNPTVTTTK 660
  661 FWSESFATTE TVTNGPEGTD SVIIKEPHNP TVTTTKFWSE SFATTETVTN GPEGTDSVII 720
  721 KEPHNPTVTT TEFWSESFAT TETITNNPEG TDSVIIKEPH NPTVTTTKFW SESFATTETI 780
  781 TNNPEGTDSV IIKEPHNPTV TTTEFWSESF ATTETITNGP EGTDSVIIKE PHNPTVTTTK 840
  841 FWSESFATTE TVTNGPEGTD SVIIKEPHNP TVTTTKFWSE SFATTETVTN GPEGTDSVII 900
  901 KEPHNPTVTT TEFWSESYAT TETITNGPEG TDSVIIKEPH NPTVTTTKFW SESFATTETI 960
  961 TTGPLGTDSI VIHDPLEESS SSTAIESSDS NISSSAQDSS SSVEQSFTSA DETSSIVELS1020
 1021 SSSDIPSSSI GLTSSESSTV SSYDSYSSST SESSIASSYD SYSSSSIESS TLSSSDRYSS1080
 1081 SISDTTSFWD SSSSDLESTS ITWSSSIDAQ SSHLVQSVSN SISTSQEISS SSSEESSTSA1140
 1141 TDALVSSDAS SILSSDTSSY YPSSTISPSD DFPHTIAGES DSQSFSFITS TVEISSDSVS1200
 1201 LTSDPASSFD SSSRLNSDSS SSPSTDQRDI LTSSSFSTLI KSSESRESSS GTILSEESSD1260
 1261 SIPTTFSTRY WSPSGMSSRH YTNSTETSVS DVVSSSVAGD ETSESSVSVT SESSESVTSE1320
 1321 SVASESVTSE SVTAVSDISD LYTTSEEVST SDSNSGMSSP IPSSEQRSSI PIMSSSDESS1380
 1381 ESRESSIGTI LSEESSDSIP TTFSTRYWSP SGMSSRHYTN STETSVSDVV SSSVAGDETS1440
 1441 ESSVSVISES SESVTSESVA SESVTAVSDI SDLYTTSEVV STSDSKIVPS TSVPSSEQRS1500
 1501 SIPIMSSSDE SSESRESSSG TILSEENSDS IPTTFSTRYV SVSLTVGELS ALPSLPGKLS1560
 1561 HLPSSLSETS IGMTKSANLS PQFFSTSVDS ALSYWASGSS SADHQSSATC DVSESSVEGN1620
 1621 LSAMALGMSN SDDGLSEDTR SSSVAGKEEI ELTSTNSVGE ITLISYSSSS PTTHDHGRVS1680
 1681 KSMGAAPLSS LFSVSVHAPL VTGLSDSDTF PSENSNRSRS FKESTDNTIS ISRESLGNPY1740
 1741 SSISSPSDYD VKSFTTSREL VSSESILPFS DVMDANDMPT SGSNLHSMVF SISVLGEKFN1800
 1801 ANIEKHKNTN GHYSSMVFTY QSAGLEESDQ RIAVTNTKFD QNKIDTTIDS NTFVTSLPFA1860
 1861 TTLNDQIDQA VPIKIPASST AGFVSDVLKP DYSKSVQAES VQTDSTTYSE MMSSKRNKNS1920
 1921 GFGTSSLNLK PTITVVTKSI DTKVNTMKEG GVSKQVSTTV TEQYDTSTYT PASLLVSDNS1980
 1981 GSVSKYSLWM MAFYMLFGLF 

YRC Informatics Platform - Version 3.0
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