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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.454
Protein type: Globular with Signal Peptide
Type Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSHLVSSSLG TTTTATPTSR SPHTNHSTPY NQNSITSNRS SPVPKNSVNS RIIPQTMNPP  60
   61 IDMKSNNILN PEKDTDTSRG DHSESKASSI SSASGTTTTN NNNVSNNNST GKTQIVFIHK 120
  121 LYDMLHDESI SHLIWWSPSL DSFYVTPGEE FSRVLSQYFK HTNIASFIRQ LNMYGFHKVN 180
  181 EPFLNQDDQQ QQQQLQSNRW EFRHSTNQFR KGDTESLKNI KRRSSKTLNA QKEVVNIKSL 240
  241 PPTSHPMEYN TGYSYQNEDS AHYFVHHHSI TTMQSPADMR PRSPSTPIPM QPLAQQQQQQ 300
  301 QQQQQQQQQQ LPSQPVPNGP PVFSGPIPPG AVNQSPQEYL TRPSILNNVQ GSFENATNFK 360
  361 FVELTNQINL LRNDFFTMNN RYEILQNELK YQTADSMAVL EILEKLSNDN RIATDIRDLK 420
  421 NVVSQRMQRL NNQFIPQQSN FAPHIPGQQQ QQQHGNSVSS NYHLESTNVS RNPSTTNLNV 480
  481 APQPYPLNPH YTIYANNRAS GSSEINNGVF RAREDSNNSK RNLSVYDPLQ PVPSRNSSRI 540
  541 LIEESTPTHP PTNFNPQQSQ SQSQVQLGPA MPPQGFRNRA ESTYSPLSHS SNKSQILNKA 600
  601 PTPVNHSPLV QQQQKEAKQE LNDSSVAPPS QSSLPVTRPL SRQQQQQQQT LHHPSTTSSR 660
  661 TNSLPNPVAE HPAPQSSYFM QRNSFNTIYE HQKSLRVPSP KRVRYATPPR SIPEQPISST 720
  721 APTTMITSTS KTTSTSGAAI SRSENHSVVS LTGGALPSVS ELDKSIRTGS SVSLPPIKSI 780
  781 KDNDNKNDNG NSDDNGNDHK KRKLE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle