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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.13252, orf...
Protein type: Globular with Signal Peptide
Type Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGSLFIFYI LSIVFCAILG IDYGQQFTKA VLLAPGVPFE IVLTDEGKRK DLSGLCIRKV  60
   61 SNNDLERVYG SQMGSLVTRF PHNCILDLKQ LLGKSIDDPS VNQYLKNHFV KLVADEARNG 120
  121 IKFDLGFNNS TLEFSVEEIL AMNLNEIKSR ALNDLEANPH AAALVEDVAV SIPPFASQAV 180
  181 RQAYLDSLAL ANFSNVLGLV EEGTSVALNY ITNKKLDKDS YDNVKHYYLI YDVGAGYTTT 240
  241 TLFSFTPKSI GQSVLEIESI GYDEMLGGKT LTNSAYSLVL EKFLNQFNLE ESDLTDKIAA 300
  301 RLQDTAEKAK IILSANSDFQ TTLESVYNEK DFKLSITRQE FEDINADIMN HIADPVLKTV 360
  361 LEAGLKVDDI EYVILNGGST RVPFIQKHIA TLVGENKISK SVNTDESSAL GTTAKALRLK 420
  421 AGVSSGKDMI LLEKSFSNFE VGLNDQEETK VVFAKGATIG NTTRVHLGKI SEDRIAISLY 480
  481 ENGALIKSYN FDDLLSKAKK LDCKLIEDKN IFGKLSLDNN KIFDLVGLEV ECSSGKEGSF 540
  541 FDKLMKKGHS ENDEGSDNQE ESTPENSTNS TKNSNSSKKV RSPKVIYVPV SKPTYPHIKP 600
  601 IGRVAKQSLL DKLAYLKAQD ELKIATDHIK NELEGQCYKL REFIETHHSE LLQELSEQDL 660
  661 EETTTFVGDL IEWLDFESDD STLDELNSKV DEVNSKFSEV RRYKEIATTD LSKEGLKKLY 720
  721 DDSSNLIMKI QTSMLEFGTK ISEVREKYED AGLDFDKANE RIKQILTGKG EDKMLSFDKT 780
  781 LKSYKQVITE IAKVLEYDDK DFSKVAKSQL YSYHEKLAKG VADMFADVIS IESLHLDRME 840
  841 LFNQHFEQLL ERKKQQELRR KLREAQKAAK EEQKEQETKP EEVEIIEEED EVVEEVPKQT 900
  901 TTDDSLEQNT NSVDENSSTE NKKKPDVEHD EL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle