YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76573804
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLSKAVAIS ILTSLIGVQG LLIPSVGDII DVFGDSVQKQ ITNKLEPLKD AAHHAAEHLG  60
   61 MTLQEKLAPI VNSESTRDII PHKYIVVFKQ DVGANEIAFH QEWVALTHTN SLNGLDDQHS 120
  121 FFAATKDIKP EGGGITDTFD IGNLLNGYTG FFLDETIDLI RKNPLVAFVE KDSLVHANEF 180
  181 DIEKGAPWGL ARVSHRQPLS LSSFDQYLYD SEAGAGVTAY VIDTGVNVKH EEFSGRAKWG 240
  241 KTIPQGDSDI DGNGHGTHCA GTIGSNDYGV AKKAEIVAVK VLRSNGSGTM SDVVKGVEYA 300
  301 AKSHQEAVKS SKKGFKGSTA NMSLGGGKSP ALDLAVNAAV KAGLHFAVAA GNENQDACNT 360
  361 SPASAELAIT VGASTISDAR AYFSNYGKCV DIFAPGLNIL STYIGSDTAT AYLSGTSMAS 420
  421 PHICGLLSYF VSLQPGADSE FFVAADGISP SQLKKNLIAY GTSDVLSDIP EDTPNILAFN 480
  481 GAGHNLTKFW GNN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle