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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.4381, orf1...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYSENPGSI PKSKSAAPSS SETKMLFGTK LDHEIYPPWK DFYISYNHLK KLLKEGVILK  60
   61 NNWTDKDEQN FVSALDENLE KVFGFQHKKF DELNDELNDL QQQTERTDTF NLESFSKKLD 120
  121 KILDEAQNLE HFQRLNYTGF IKIVKKHDRI HPEYSVKPLL NVRLKKLPFH SEDYSPLLYK 180
  181 VGTLYQFLRD NYEVDQSLSK LSSFNEGATN GEFQSFKFWI HPDNLMEVKT TILRHLPVLI 240
  241 YNSTNNGDDD DDDDDDDDED DNNKHITGGQ TINCLYLDND HFDLYNHKLT KLNNSSTVRI 300
  301 RWVGKLADKP KISMERKSFD VNSNFFVDDK IELRQKYINQ YVIQKEIPKK LVKLNDANSV 360
  361 KKLLDFIKEY NLQPILRTTY NRTAFQIPGD DRIRIIIDSN LTFIREDSFD SQLPIRDPQQ 420
  421 WHRLDLDNSK SPQQFLRKGE FVKFPFSTME IKIKKSSAKN FKKLQWVNEL INSSYLVKEI 480
  481 PNFSKFIHGV ASLFLEDDKL DNIPMWFNEL EGDINDDLPK LPSKINNNGI PELSNDENLS 540
  541 KFKSMILNNK TSNFQPRSAS FSGSLLYTKD NENESGTQRI ETIEEDVGPS DNNGAKPLSS 600
  601 ARVTTDDQSS DFDEDEDEDE DDAGRRSNPL VRIMNLPNQF SKLVDVDSED EEIDLPAGVT 660
  661 KPDQWIKNMG PIKIEPKVWL ANERTFNRWL HVTTLLSSLT FIIYSSTSGS NFEGLSTYLA 720
  721 YFYFALTLFS GLWAYYIFME RRKIILERSD KHLDNSFGPL IIALGLTIAL IFNFIFGWKN 780
  781 LNLDPNDEFY NNNPTQKKVH EFMVNMVN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle