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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.11026, orf...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRTADDAQQ IDNGDQQREG VLDEYAQEGE YESSSDYDDE SFVDKKEKSR RPKENSFTQQ  60
   61 RLKAINPVLT AKTVIPLLVA IAIVFVPLGA AMWYASHKIE DITIDYSQCQ NLARFDYWSE 120
  121 IPDNFTTYNF RNIDTNSESK PKFSWKLAND TSQQFDDEKL VCQVQFEVVE KMKGPIYLYY 180
  181 RLHNFYANHR RYVKSFSEDQ LNGKPATLNT IKNTVGQNCQ PLSDVNGKRI YPCGLIANSL 240
  241 FNDTFTEAFE AVNGTSSDNT LVLTDKGIAW STDKNRFKKT QYNYTEVVPP PNWYKKFPNG 300
  301 YNETNIPDIS TWYQFQNWMR PSALATFNKL ALRNDTGSLE RGIYQINVGL HFPVLPYKGK 360
  361 KYLYITQRSV IGGKNDFLGI SWMVGGGVCF ILGLALLVIN FVKPRKTGDV NLLSWNQEKT 420
  421 KRDEQSAAAA EGVTTGFEK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle