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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.1392, orf1...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLSILSLLG FLTTAAVGVV GSEINPLEPQ IIADQVTNGE HKRQSDDESN SQLKSQSKMD  60
   61 VPPTLSMKEF DKLTREKLVL VEFFSPYCHH CKEFAPTWKE TYIKFVTEYP DLNIEMKQVN 120
  121 CIESGDLCER EHIDFYPNIL LYAPAVDKDG KKTGKSKNID SFPRNLDRNV ENIIKYLREA 180
  181 TAEFDSGAIN LPSSSQLLDV DTMSKIIDGN ISTPMFVSFF PATKRQWKSV EHRGRLGFSN 240
  241 CEDCLPAKQI WDRLSNKILS ISDTGHFMCR DHREVCDKLK ITSNNEPQFI MFLPESIGAV 300
  301 RFDYNDYVDV NRMKWWVQKL FQNSQFEVVS ARGITEVMEY TKVLSHEPIA QFYPLKSKIT 360
  361 VVFYYDIDKV TEEDEKILPH LLKTIQESPF NIQLHKGKHK KIEENVLTMG QNLIEYINYD 420
  421 ENDKYEFDKS IQVLTTLTTK PTILVFKDNS LIADVYQSLS PEDMKTYDKV ESFINSIQYP 480
  481 LYGQLTPQLA PYYFKNNEKY QDHKVVVLFT DLSDLKGTDN QLYKLSLAAH EYHHLKQKYY 540
  541 FDRFKQSNQV SAATVEKLQE QNQETIDALK ELQHVIPELW ENDQVLFTFI DLPNAYKQFR 600
  601 GVKGWRLNPN NYQVGDVVVL SKDNRYYWNK DTQGNKLTNE PKELKKVLMS LLAKDDKLKA 660
  661 AIVGSPYGGV LGFMDYVHDY GVWGYIGFFL SIYTTGFLVL RLGRRSSRRW LFKRPSSSTP 720
  721 SSGGGGIIGN NFTPKKD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle