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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PALI_CANAL
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.49
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKAFIALLI LLIVCWVIQL LPVIAVPFTT PDANIYLSYY NNYRFGVFGI CNVERHICSK  60
   61 PSIGYPSTNS TFYAYDNDES FGTGGIVLPS DVRYTISKLL VVHVVAFCFS SLLLIVIFGL 120
  121 IIILFFKYIK TKKDLEDIQL NDSSHEITIH SDEEDNNNNN IDNTNHNNKR ASVTINKTIF 180
  181 DLTPFLNLML VFTFFSVLTT LLAFLADILL FTPNLSYLGW LQLIPIVSMA LVTSMLCFIE 240
  241 RSISSRKFFE SEYRYANDDM RIMRKTYVDE FWNDNASDDG FYVYTDGFYT RNGDNVQQPT 300
  301 SNTAGSLLSE HHDVSIVEPR TFLDTDDSRR GSSPHEFIEL QNLRPV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle