YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	orf19.7746
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTLFISTLS ILLVSLLFTY KPLTTKLNLF TRFISMSHTT HPYQKELEVA TLAVKRASLL  60
   61 TKQLSDSIVQ TARSGTLTKD DKSPVTIGDF ASQAIINHAI KLNFPSDEIV GEEDSQELQE 120
  121 NSSLADQVLS LIIKIQQETS VYNDVVGTLT DKNKVFQSID YGNSQGGSKG RFWALDPIDG 180
  181 TKGFLRGDQF AVCLALIEDG KVVLGVIGCP NLSENIVSNE EHSGVVGGLY SAVKGVGSFY 240
  241 SELFKEGAEP LSQQKPIKMQ NHTNPSQLKV VEGVEKGHSS HSTQAEIKAK LGFDSATVAK 300
  301 QTVNLDSQVK YCVLASGQAD IYLRLPVSDT YREKIWDHAA GNILIYESGG QVGDVTGSPL 360
  361 NFGNGRTLDS KGVIAANKEI FNKVIDAVTE VRNSSTPKV

Type	Start	End	Confidence
Signal Peptide	1	19	0.96
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	399	0.99