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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.8309, orf1...
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVWQSILLF LVGCVLSKSP TNLYTPGYVQ CPEGKLTRSS LDGINSNEKA YIDRRYANAK  60
   61 SELSKFLHNA KIVDFDVDGF LETANPTIGL AFGGGGYRAM LVGAGELLAL DSRATNPSVL 120
  121 SGILQSSSYI VGLSGGSWLV GSLASNDLIP VDQLLREDKL WDIQNSLVAY YGVNIVRNTA 180
  181 MWGNINLQVQ TKQLAGFTVS ITDVYGRALS HQLLTNFDNQ RASFLWSDVT ETTSFQNNEM 240
  241 PYPILAALGR EPNTVLMNFN STVFELTPYE VGSWDPSLRS FVDTKYIGTR LDDGAPVSKR 300
  301 CVNGFDNAGF FMGTSSSLFN IVLQQLNNMP IPPFLKELIS KFTLDPVEKL NIDIAQYNPN 360
  361 PFHKSNNSDT KIAQSRTLYL ADGGEDGQNV PLLPLIHRKV SAIFAFDQSA DKNNWPDGSA 420
  421 LIKTFERQFS SQGDGIAFPY VPDQNTFRNL NLTSKPTFFG CDAQNLTSLT ENIYDVPVVI 480
  481 YLANRPFTYF SNTSTFKLKY SDTERQGMIS NGYDVASRLN GKLDNEWAAC VGCAIIRREQ 540
  541 ERLGIEQTEQ CKKCFENYCW DGTIYKGEPL GDNFSDEGLT TSAADYNSNN VAGINDGGIA 600
  601 LVKRDDLSN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle