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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.8633, orf1...
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSFLTEVTG AIAQTSARRP IQFMVVPALL ASIAYLSIID DYIPEHIKSS SGSSGISYYH  60
   61 PYTSSHYKSQ PDLDKWTAID KEHINDDIYT QANQISVIPL RFRRFQDVVP NVPNAIHISD 120
  121 NEQILIVPTD QIENSLDQLQ EITNNGITWK ARNNDKLAKY YDYIRYGLNK VQDAIQHAEN 180
  181 FDILLIFVAY LGMWYALIKV FVDMRKIGSK FWLAFSTLTS STFAFLLALL VSNKFLHTKV 240
  241 SLLSLSEGIP FLVSVIGFKH KVSIATIVAN SSTASPEDVP HVVGKAVSSH CLSMLRDHLV 300
  301 VIGGLLSCAI YAHHLTGLRN FCILSSLILS FDLILVYTFF SAILGLKVEI NRARRTEDLQ 360
  361 NALEEEGISS LVAARVAEQS ATIEHPNEHN FFKSNNSSIA YFKVIMSLGF FAFHAFWLGS 420
  421 SWLYSTTDGG ESFSRFSFLS NIPTLSQDIS QQIPIGKKGT VVTILPTIFF MPSGFMVQLE 480
  481 DFIYLVLSKF SSAIRDSIIS KFLVFGFALS IVTNVYFLNA ARYQVSATHK LIEKEISRPQ 540
  541 DSSVTATTTT TATGTTSSGA ATSKAIGNNK GLKSVQEIPD NEDESSDEEL EIKAPVKVLP 600
  601 LEECVKVLKE GKVKTLSNDE VSSLVVGGKL PLYALEKQLA DNKRAVIVRR KAIAKLANAP 660
  661 VLDTNRLPYA HYDYDRVFGA CCENVIGYMP LPVGVAGPLI IDEKPYHIPM ATTEGCLVAS 720
  721 TMRGCKAINA GGGVETVLTR DGMTRGPCVR FPTLKRAGAA KLWIDSEQGQ ATIKKAFNST 780
  781 SRFARLQHIQ TALAGTSLFI RFRTTTGDAM GMNMISKGVE YSLKYMVEEC GWDDMEIVSV 840
  841 SGNYCTDKKP AAINWIEGRG KSIVAAARIP ADVVTKVLKS DVDALVELNI SKNLVGSAMA 900
  901 GSVGGFNAHA ANLVTAVYLA CGQDPAQNVE SSNCITLMEK DKETGDLNVS VSMPSIEVGT 960
  961 IGGGTILEPQ GAMLDLLGVR GPHPTNPGAN AQQLAKIVAS AVLAAELSLC SALAAGHLVQ1020
 1021 SHMQHNRSKA PAAGATTTTT PAITDSKASN GSIASNGKDL KRLEEGSVTC IKS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle