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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.5634, orf1...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIPFDQQFF VEKDRNNKYE WLIFVLTFIV LAGHGILFYW IPRYLRVNNK RNNYFRLLKV  60
   61 WDAWTSCVHV WGDFYFQPSL VLLGILFVGL NVGFCFAEIN DLDYQSRFYI ISKRLSKVAV 120
  121 GNLPILLFAV MKNDLLTSIT GLQHDRLEFV HKWLSRLMWV MITIHMGMAC YYWLNLNFKI 180
  181 MIMIPPQIFG FMAYGSFSIL NWASLKFIRQ FAYDFFLVQH RIFAFMMLFF TFIHNQGNRA 240
  241 VVLISVHGLV IDRVVSKVFA YLHAKKSPTK GRCTFRIIDD STISVVIPVS EAGYTSKSWY 300
  301 TRFLPKYKTW KAGQHIYLNV GKIKFFQYHP FTISSLAESG EMKLLIRVER GFTRKLMRHL 360
  361 EQVDHDEVTI KAMFHGPYGA RYQPLITFDT CLFFAAGSGG AFTFPVCLDL LNQIDRRDQE 420
  421 GDVLFRPKNQ FIKFVWAIRK QDNIEWFEDS LKQFAGRCSV DIYITQETKE ELPLQKKNSI 480
  481 IEITKSLTND YNILYGRPQI QDIIQQHSQS LGANQSMAVT SCGSPSFTNS IKHHCQSARR 540
  541 VKGAPEVYCY TESF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle